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RPS17P6 ribosomal protein S17 pseudogene 6 [ Homo sapiens (human) ]

Gene ID: 391130, updated on 17-Sep-2024

Summary

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Official Symbol
RPS17P6provided by HGNC
Official Full Name
ribosomal protein S17 pseudogene 6provided by HGNC
Primary source
HGNC:HGNC:36945
See related
Ensembl:ENSG00000213068 AllianceGenome:HGNC:36945
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS17_1_116
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Genomic context

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See RPS17P6 in Genome Data Viewer
Location:
1q24.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (167162380..167162862, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (166509418..166509900, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (167131617..167132099, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene glycoprotein A33 Neighboring gene uncharacterized LOC124904451 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2034 Neighboring gene Sharpr-MPRA regulatory region 8817 Neighboring gene serine/threonine/tyrosine interacting like 2 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:167090819-167091389 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:167094915-167095545 Neighboring gene uncharacterized LOC105371601 Neighboring gene long intergenic non-protein coding RNA 1363

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011125.1 

    Range
    101..583
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    167162380..167162862 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    166509418..166509900 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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