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KRT18P47 keratin 18 pseudogene 47 [ Homo sapiens (human) ]

Gene ID: 390634, updated on 17-Sep-2024

Summary

Official Symbol
KRT18P47provided by HGNC
Official Full Name
keratin 18 pseudogene 47provided by HGNC
Primary source
HGNC:HGNC:33417
See related
AllianceGenome:HGNC:33417
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See KRT18P47 in Genome Data Viewer
Location:
15q26.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (88959720..88961115)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (86714616..86716011)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (89502951..89504346)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6792 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:89450127-89451112 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:89455820-89456351 Neighboring gene CRISPRi-validated cis-regulatory element chr15.3122 Neighboring gene CRISPRi-validated cis-regulatory element chr15.3123 Neighboring gene CRISPRi-validated cis-regulatory element chr15.3124 Neighboring gene milk fat globule EGF and factor V/VIII domain containing Neighboring gene non-histone chromosomal protein HMG-14-like Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10037 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10038 Neighboring gene MPRA-validated peak2417 silencer Neighboring gene MPRA-validated peak2418 silencer Neighboring gene CRISPRi-validated cis-regulatory element chr15.3128 Neighboring gene CRISPRi-validated cis-regulatory element chr15.3129 Neighboring gene capping actin protein of muscle Z-line subunit alpha 2 pseudogene Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:89536398-89537299 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr15:89542092-89542895 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:89545400-89546011 Neighboring gene Sharpr-MPRA regulatory region 4646 Neighboring gene H3K27ac hESC enhancer GRCh37_chr15:89547127-89547627 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:89574853-89575354 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:89592211-89592762 Neighboring gene H3K27ac hESC enhancer GRCh37_chr15:89602566-89603066 Neighboring gene coronary artery disease region linked MFGE8 regulatory lncRNA Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10039 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10040 Neighboring gene abhydrolase domain containing 2, acylglycerol lipase

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_009743.3 

    Range
    101..1496
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    88959720..88961115
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    86714616..86716011
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)