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RPL5P22 ribosomal protein L5 pseudogene 22 [ Homo sapiens (human) ]

Gene ID: 389644, updated on 17-Sep-2024

Summary

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Official Symbol
RPL5P22provided by HGNC
Official Full Name
ribosomal protein L5 pseudogene 22provided by HGNC
Primary source
HGNC:HGNC:35695
See related
Ensembl:ENSG00000239198 AllianceGenome:HGNC:35695
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL5_12_886
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Genomic context

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See RPL5P22 in Genome Data Viewer
Location:
8p21.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (28299610..28300627)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (28577777..28578794)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (28157127..28158144)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene delta 4-desaturase, sphingolipid 1 pseudogene Neighboring gene PDZ and LIM domain 7 (enigma) pseudogene Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr8:28130200-28131399 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:28175778-28176290 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:28176291-28176802 Neighboring gene prepronociceptin Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19052 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27162 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27163 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27164 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27165 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19053 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27166 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:28200887-28201454 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:28203430-28203930 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:28205819-28206378 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:28206379-28206938 Neighboring gene zinc finger protein 395 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:28216758-28217258 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:28217259-28217759 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27167 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:28222946-28223446 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27168 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:28241577-28241751 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19054 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19055

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011351.3 

    Range
    101..1118
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    28299610..28300627
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    28577777..28578794
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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