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RPSAP29 ribosomal protein SA pseudogene 29 [ Homo sapiens (human) ]

Gene ID: 389141, updated on 17-Sep-2024

Summary

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Official Symbol
RPSAP29provided by HGNC
Official Full Name
ribosomal protein SA pseudogene 29provided by HGNC
Primary source
HGNC:HGNC:36680
See related
Ensembl:ENSG00000244722 AllianceGenome:HGNC:36680
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPSA_6_392
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Genomic context

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See RPSAP29 in Genome Data Viewer
Location:
3q13.13
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (110682216..110683230, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (113402391..113403405, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (110401063..110402077, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105374037 Neighboring gene RNA, U6atac small nuclear 15, pseudogene Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr3:110295653-110296241 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:110317374-110318228 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:110385405-110385904 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr3:110404170-110404746 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:110607916-110608531 Neighboring gene putative uncharacterized protein LOC151760 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr3:110683374-110684573 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr3:110764172-110765371 Neighboring gene NECTIN3 antisense RNA 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14597 Neighboring gene nectin cell adhesion molecule 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Proteomic Analysis of the EWS-Fli-1 Interactome Reveals the Role of the Lysosome in EWS-Fli-1 Turnover. Elzi DJ, et al. J Proteome Res, 2014 Aug 1. PMID 24999758, Free PMC Article
  2. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. Balasubramanian S, et al. Genome Biol, 2009. PMID 19123937, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_010100.2 

    Range
    101..1115
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    110682216..110683230 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    113402391..113403405 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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