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RPS27P4 ribosomal protein S27 pseudogene 4 [ Homo sapiens (human) ]

Gene ID: 389112, updated on 17-Sep-2024

Summary

Official Symbol
RPS27P4provided by HGNC
Official Full Name
ribosomal protein S27 pseudogene 4provided by HGNC
Primary source
HGNC:HGNC:16694
See related
AllianceGenome:HGNC:16694
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPS27_5_366
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Genomic context

See RPS27P4 in Genome Data Viewer
Location:
3p22.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (40761512..40761856)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (40776582..40776926)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (40803003..40803347)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14234 Neighboring gene uncharacterized LOC124909370 Neighboring gene high mobility group nucleosomal binding domain 2 pseudogene 24 Neighboring gene uncharacterized LOC105377043 Neighboring gene MPRA-validated peak4616 silencer Neighboring gene NANOG hESC enhancer GRCh37_chr3:40885161-40886029 Neighboring gene uncharacterized LOC124906230 Neighboring gene NANOG hESC enhancer GRCh37_chr3:40912794-40913474 Neighboring gene NANOG hESC enhancer GRCh37_chr3:40961458-40962007 Neighboring gene Sharpr-MPRA regulatory region 10975 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19721 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:41010264-41010764 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr3:41012603-41013802 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:41037247-41037747 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:41039383-41040340 Neighboring gene Sharpr-MPRA regulatory region 4350 Neighboring gene uncharacterized LOC105377045

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_005671.3 

    Range
    101..445
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    40761512..40761856
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    40776582..40776926
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)