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PF3D7_0619400 cell division cycle protein 48 homologue, putative [ Plasmodium falciparum 3D7 ]

Gene ID: 3885942, updated on 12-Sep-2024

Summary

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Gene symbol
PF3D7_0619400
Gene description
cell division cycle protein 48 homologue, putative
Locus tag
PF3D7_0619400
See related
PlasmoDB:PF3D7_0619400; VEuPathDB:PF3D7_0619400
Gene type
protein coding
RNA name
cell division cycle protein 48 homologue, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
Orthologs
all
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Genomic context

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See PF3D7_0619400 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
2
Sequence:
Chromosome: 6; NC_004327.3 (815622..818247, complement)

Chromosome 6 - NC_004327.3Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene acyl-CoA synthetase Neighboring gene conserved Plasmodium protein, unknown function

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004327.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Proteomic analysis of extracellular vesicles from a Plasmodium falciparum Kenyan clinical isolate defines a core parasite secretome. Abdi A, et al. Wellcome Open Res, 2017. PMID 28944300, Free PMC Article
  2. Functional Characterization of the m(6)A-Dependent Translational Modulator PfYTH.2 in the Human Malaria Parasite. Sinha A, et al. mBio, 2021 Apr 27. PMID 33906926, Free PMC Article
  3. Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation. Briquet S, et al. PLoS One, 2018. PMID 30379851, Free PMC Article
  4. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556
  5. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by GeneDB

Function Evidence Code Pubs
enables ATP hydrolysis activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables RNA binding HDA PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within ERAD pathway ISS
Inferred from Sequence or Structural Similarity
more info
  
acts_upstream_of_or_within regulation of cell cycle process ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
located_in endoplasmic reticulum ISS
Inferred from Sequence or Structural Similarity
more info
  
located_in extracellular vesicle HDA PubMed 
located_in nucleus HDA PubMed 

General protein information

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Preferred Names
cell division cycle protein 48 homologue, putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004327.3 Reference assembly

    Range
    815622..818247 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_961086.2 → XP_966179.2  cell division cycle protein 48 homologue, putative [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_966179.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A024VAR9, A0A024VGH6, A0A024WTG1, A0A024XAP1, A0A0L1I5W1, A0A0L7K7I2, A0A0L7LZ25, C6KT34, W4I6F3, W4IUZ9, W7F4M2, W7FYP8, W7JFU7, W7K9I0
    Conserved Domains (1) summary
    TIGR01243
    Location:28 → 785
    CDC48; AAA family ATPase, CDC48 subfamily
Nucleotide Protein
Heading Accession and Version

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