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IGHV3OR16-8 immunoglobulin heavy variable 3/OR16-8 (non-functional) [ Homo sapiens (human) ]

Gene ID: 388255, updated on 2-Nov-2024

Summary

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Official Symbol
IGHV3OR16-8provided by HGNC
Official Full Name
immunoglobulin heavy variable 3/OR16-8 (non-functional)provided by HGNC
Primary source
HGNC:HGNC:5643
See related
Ensembl:ENSG00000271130 IMGT/GENE-DB:IGHV3/OR16-8; AllianceGenome:HGNC:5643
Gene type
other
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
IGHV3OR168; IGHV3/OR16-8
Summary
Predicted to enable antigen binding activity. Predicted to be involved in immunoglobulin mediated immune response. Predicted to be located in extracellular region and plasma membrane. Predicted to be part of immunoglobulin complex. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See IGHV3OR16-8 in Genome Data Viewer
Location:
16p11.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (33009124..33009646)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene rho GTPase-activating protein 23-like Neighboring gene proline rich 21 pseudogene Neighboring gene immunoglobulin heavy variable 3/OR16-10 (non-functional) Neighboring gene uncharacterized LOC112268181 Neighboring gene NANOG hESC enhancer GRCh37_chr16:33042552-33043053 Neighboring gene translation initiation factor IF-2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000016.10 Chromosome 16 Reference GRCh38.p14 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Organization of variable region segments of the human immunoglobulin heavy chain: duplication of the D5 cluster within the locus and interchromosomal translocation of variable region segments. Matsuda F, et al. EMBO J, 1990 Aug. PMID 2114977, Free PMC Article
  2. The repertoire of human germline VH sequences reveals about fifty groups of VH segments with different hypervariable loops. Tomlinson IM, et al. J Mol Biol, 1992 Oct 5. PMID 1404388
  3. Human immunoglobulin VH and D segments on chromosomes 15q11.2 and 16p11.2. Tomlinson IM, et al. Hum Mol Genet, 1994 Jun. PMID 7951227
  4. The ubiquitin-dependent ATPase p97 removes cytotoxic trapped PARP1 from chromatin. Krastev DB, et al. Nat Cell Biol, 2022 Jan. PMID 35013556, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh38)

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    33009124..33009646
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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