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Mrtf Myocardin-related transcription factor [ Drosophila melanogaster (fruit fly) ]

Gene ID: 38338, updated on 18-Sep-2024

Summary

Official Symbol
Mrtfprovided by FlyBase
Official Full Name
Myocardin-related transcription factorprovided by FlyBase
Primary source
FLYBASE:FBgn0052296
Locus tag
Dmel_CG32296
See related
AllianceGenome:FB:FBgn0052296
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG12188; CG14951; CG32296; Dmel\CG32296; dMrtf; dMRTF; DMRTF; mal; mal-d; Mal-D; MAL-D; MRTF
Summary
Enables DNA-binding transcription factor binding activity and transcription coactivator activity. Contributes to DNA-binding transcription activator activity, RNA polymerase II-specific. Involved in several processes, including ameboidal-type cell migration; cellular response to hypoxia; and imaginal disc-derived wing morphogenesis. Located in cytoplasm and nucleus. Is expressed in several structures, including embryonic/larval muscle cell and ovary. Human ortholog(s) of this gene implicated in acute megakaryocytic leukemia; congenital megabladder; and immunodeficiency 66. Orthologous to several human genes including MYOCD (myocardin) and MRTFA (myocardin related transcription factor A). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See Mrtf in Genome Data Viewer
Location:
62F2-62F3; 3-4 cM
Exon count:
7
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (2717615..2766536, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (2717615..2766480, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene fife Neighboring gene uncharacterized protein Neighboring gene Accessory gland protein 62F Neighboring gene Adenosylhomocysteinase like 1 Neighboring gene Novel nucleolar protein 2

Genomic regions, transcripts, and products

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by FlyBase

Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
Myocardin-related transcription factor
Names
CG32296-PD
CG32296-PG
CG32296-PH
Mrtf-PD
Mrtf-PG
Mrtf-PH
myocardin-related transcription factor

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    2717615..2766536 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001259651.3NP_001246580.1  Myocardin-related transcription factor, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001246580.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q6B4I4, Q9VZY2
    Conserved Domains (2) summary
    smart00707
    Location:94119
    RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
    pfam02037
    Location:578612
    SAP; SAP domain
  2. NM_001144407.4NP_001137879.3  Myocardin-related transcription factor, isoform H [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001137879.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    B7Z043, Q6B4I4
    Conserved Domains (2) summary
    smart00707
    Location:387412
    RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
    pfam02037
    Location:871905
    SAP; SAP domain
  3. NM_001144406.3NP_001137878.2  Myocardin-related transcription factor, isoform G [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001137878.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q6B4I4, Q9VZY2
    Conserved Domains (2) summary
    smart00707
    Location:94119
    RPEL; Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2
    pfam02037
    Location:578612
    SAP; SAP domain