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Gm15091 predicted gene 15091 [ Mus musculus (house mouse) ]

Gene ID: 382244, updated on 17-Aug-2024

Summary

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Official Symbol
Gm15091provided by MGI
Official Full Name
predicted gene 15091provided by MGI
Primary source
MGI:MGI:3712222
See related
Ensembl:ENSMUSG00000095082 AllianceGenome:MGI:3712222
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 3.2) See more
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Genomic context

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See Gm15091 in Genome Data Viewer
Location:
X F3; X 68.46 cM
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (148724614..148767978)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (149941618..149984982)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_48062 Neighboring gene histidine-rich glycoprotein-like Neighboring gene predicted gene 6512 Neighboring gene STARR-seq mESC enhancer starr_48063 Neighboring gene ovary testis transcribed pseudogene Neighboring gene ovary testis transcribed pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Ott, a mouse X-linked multigene family expressed specifically during meiosis. Kerr SM, et al. Hum Mol Genet, 1996 Aug. PMID 8842733
  2. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
ovary testis transcribed

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001122735.1 → NP_001116207.1  ovary testis transcribed

    Status: VALIDATED

    Source sequence(s)
    BX001010
    Consensus CDS
    CCDS53217.1
    UniProtKB/TrEMBL
    B1AZM2, E9Q1L3
    Related
    ENSMUSP00000108360.2, ENSMUST00000112740.2
    Conserved Domains (1) summary
    PRK12678
    Location:224 → 392
    PRK12678; transcription termination factor Rho; Provisional

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    148724614..148767978
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011247835.2 → XP_011246137.1  ovary testis transcribed isoform X1

    UniProtKB/TrEMBL
    E9Q1L3
    Conserved Domains (1) summary
    PRK12678
    Location:224 → 392
    PRK12678; transcription termination factor Rho; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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