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Gm973 predicted gene 973 [ Mus musculus (house mouse) ]

Gene ID: 381260, updated on 2-Nov-2024

Summary

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Official Symbol
Gm973provided by MGI
Official Full Name
predicted gene 973provided by MGI
Primary source
MGI:MGI:2685819
See related
Ensembl:ENSMUSG00000047361 AllianceGenome:MGI:2685819
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Orthologous to human KIAA2012 (KIAA2012). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in testis adult (RPKM 3.7), bladder adult (RPKM 1.9) and 9 other tissues See more
Orthologs
human all
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Genomic context

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See Gm973 in Genome Data Viewer
Location:
1 C2; 1 30.13 cM
Exon count:
26
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (59555423..59678664)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (59516264..59636417)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer mm9_chr1:59538687-59538988 Neighboring gene predicted gene, 53556 Neighboring gene STARR-seq mESC enhancer starr_01044 Neighboring gene frizzled class receptor 7 Neighboring gene predicted gene 28411 Neighboring gene predicted gene, 39648 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:59659525-59659708 Neighboring gene predicted gene, 33833 Neighboring gene small ubiquitin-like modifier 1 Neighboring gene STARR-seq mESC enhancer starr_01052 Neighboring gene STARR-positive B cell enhancer ABC_E9465 Neighboring gene STARR-positive B cell enhancer ABC_E2544 Neighboring gene NOP58 ribonucleoprotein Neighboring gene small nucleolar RNA, C/D box 70 Neighboring gene predicted gene, 26293

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray. Tanaka TS, et al. Proc Natl Acad Sci U S A, 2000 Aug 1. PMID 10922068, Free PMC Article
  2. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  3. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750, Free PMC Article
  4. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  5. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein KIAA2012 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001013771.2 → NP_001013793.2  uncharacterized protein KIAA2012 homolog isoform 1

    Status: VALIDATED

    Source sequence(s)
    BC072561
    Consensus CDS
    CCDS35585.1
    UniProtKB/TrEMBL
    E9Q295
    Related
    ENSMUSP00000109881.2, ENSMUST00000114243.8
    Conserved Domains (3) summary
    pfam14265
    Location:977 → 1033
    DUF4355; Domain of unknown function (DUF4355)
    pfam15709
    Location:591 → 1045
    DUF4670; Domain of unknown function (DUF4670)
    cl23720
    Location:931 → 992
    RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)

  2. NM_001357842.1 → NP_001344771.1  uncharacterized protein KIAA2012 homolog isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC132574, AC147254
    Conserved Domains (1) summary
    cl25548
    Location:488 → 942
    DUF4670; Domain of unknown function (DUF4670)

  3. NM_001404390.1 → NP_001391319.1  uncharacterized protein KIAA2012 homolog isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC132574, AC147254

  4. NM_001404391.1 → NP_001391320.1  uncharacterized protein KIAA2012 homolog isoform 4

    Status: VALIDATED

    Source sequence(s)
    AC132574, AC147254

  5. NM_001404392.1 → NP_001391321.1  uncharacterized protein KIAA2012 homolog isoform 5

    Status: VALIDATED

    Source sequence(s)
    AC132574, AC147254

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    59555423..59678664
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017321327.3 → XP_017176816.1  uncharacterized protein KIAA2012 homolog isoform X3

    Conserved Domains (1) summary
    pfam15709
    Location:612 → 1122
    DUF4670; Domain of unknown function (DUF4670)

  2. XM_017321334.3 → XP_017176823.1  uncharacterized protein KIAA2012 homolog isoform X6

    Conserved Domains (1) summary
    pfam15709
    Location:586 → 1096
    DUF4670; Domain of unknown function (DUF4670)

  3. XM_017321324.3 → XP_017176813.1  uncharacterized protein KIAA2012 homolog isoform X1

    Conserved Domains (1) summary
    pfam15709
    Location:613 → 1123
    DUF4670; Domain of unknown function (DUF4670)

  4. XM_017321326.3 → XP_017176815.1  uncharacterized protein KIAA2012 homolog isoform X2

    Conserved Domains (1) summary
    pfam15709
    Location:612 → 1122
    DUF4670; Domain of unknown function (DUF4670)

  5. XM_030255081.2 → XP_030110941.1  uncharacterized protein KIAA2012 homolog isoform X9

    Conserved Domains (1) summary
    pfam15709
    Location:622 → 1076
    DUF4670; Domain of unknown function (DUF4670)

  6. XM_017321333.3 → XP_017176822.1  uncharacterized protein KIAA2012 homolog isoform X5

    Conserved Domains (1) summary
    pfam15709
    Location:587 → 1097
    DUF4670; Domain of unknown function (DUF4670)

  7. XM_030255084.2 → XP_030110944.1  uncharacterized protein KIAA2012 homolog isoform X12

    Conserved Domains (1) summary
    pfam15709
    Location:597 → 1051
    DUF4670; Domain of unknown function (DUF4670)

  8. XM_017321342.3 → XP_017176831.1  uncharacterized protein KIAA2012 homolog isoform X13

    Conserved Domains (1) summary
    pfam15709
    Location:596 → 1050
    DUF4670; Domain of unknown function (DUF4670)

  9. XM_030255076.2 → XP_030110936.1  uncharacterized protein KIAA2012 homolog isoform X7

    Conserved Domains (1) summary
    pfam15709
    Location:580 → 1090
    DUF4670; Domain of unknown function (DUF4670)

  10. XM_036166021.1 → XP_036021914.1  uncharacterized protein KIAA2012 homolog isoform X18

    Conserved Domains (1) summary
    pfam15709
    Location:503 → 1013
    DUF4670; Domain of unknown function (DUF4670)

  11. XM_017321335.3 → XP_017176824.1  uncharacterized protein KIAA2012 homolog isoform X8

    Conserved Domains (1) summary
    pfam15709
    Location:623 → 1077
    DUF4670; Domain of unknown function (DUF4670)

  12. XM_006496100.4 → XP_006496163.1  uncharacterized protein KIAA2012 homolog isoform X4

    Conserved Domains (1) summary
    pfam15709
    Location:606 → 1116
    DUF4670; Domain of unknown function (DUF4670)

  13. XM_017321337.3 → XP_017176826.1  uncharacterized protein KIAA2012 homolog isoform X10

    Conserved Domains (1) summary
    pfam15709
    Location:616 → 1070
    DUF4670; Domain of unknown function (DUF4670)

  14. XM_030255100.2 → XP_030110960.2  uncharacterized protein KIAA2012 homolog isoform X11

    Conserved Domains (1) summary
    pfam15709
    Location:615 → 1069
    DUF4670; Domain of unknown function (DUF4670)

  15. XM_030255089.2 → XP_030110949.1  uncharacterized protein KIAA2012 homolog isoform X15

    Conserved Domains (1) summary
    pfam15709
    Location:588 → 1042
    DUF4670; Domain of unknown function (DUF4670)

  16. XM_017321345.3 → XP_017176834.1  uncharacterized protein KIAA2012 homolog isoform X16

    Conserved Domains (1) summary
    pfam15709
    Location:504 → 1014
    DUF4670; Domain of unknown function (DUF4670)

  17. XM_030255096.2 → XP_030110956.1  uncharacterized protein KIAA2012 homolog isoform X19

    Conserved Domains (1) summary
    pfam15709
    Location:514 → 968
    DUF4670; Domain of unknown function (DUF4670)

  18. XM_017321344.3 → XP_017176833.1  uncharacterized protein KIAA2012 homolog isoform X17

    Conserved Domains (1) summary
    pfam15709
    Location:590 → 1044
    DUF4670; Domain of unknown function (DUF4670)

  19. XM_036166033.1 → XP_036021926.1  uncharacterized protein KIAA2012 homolog isoform X26

    Conserved Domains (1) summary
    pfam15709
    Location:252 → 762
    DUF4670; Domain of unknown function (DUF4670)

  20. XM_036166043.1 → XP_036021936.1  uncharacterized protein KIAA2012 homolog isoform X29

    Conserved Domains (1) summary
    pfam15709
    Location:201 → 711
    DUF4670; Domain of unknown function (DUF4670)

  21. XM_036166038.1 → XP_036021931.1  uncharacterized protein KIAA2012 homolog isoform X28

    Conserved Domains (1) summary
    pfam15709
    Location:262 → 716
    DUF4670; Domain of unknown function (DUF4670)

  22. XM_017321350.3 → XP_017176839.1  uncharacterized protein KIAA2012 homolog isoform X20

    Conserved Domains (1) summary
    pfam15709
    Location:381 → 891
    DUF4670; Domain of unknown function (DUF4670)

  23. XM_006496108.3 → XP_006496171.1  uncharacterized protein KIAA2012 homolog isoform X25

    Conserved Domains (1) summary
    pfam15709
    Location:272 → 782
    DUF4670; Domain of unknown function (DUF4670)

  24. XM_030255103.2 → XP_030110963.1  uncharacterized protein KIAA2012 homolog isoform X23

    Conserved Domains (1) summary
    pfam15709
    Location:383 → 837
    DUF4670; Domain of unknown function (DUF4670)

  25. XM_036166024.1 → XP_036021917.1  uncharacterized protein KIAA2012 homolog isoform X21

    Conserved Domains (1) summary
    pfam15709
    Location:384 → 838
    DUF4670; Domain of unknown function (DUF4670)

  26. XM_006496107.1 → XP_006496170.1  uncharacterized protein KIAA2012 homolog isoform X24

    Conserved Domains (1) summary
    pfam15709
    Location:282 → 792
    DUF4670; Domain of unknown function (DUF4670)

  27. XM_006496109.5 → XP_006496172.1  uncharacterized protein KIAA2012 homolog isoform X30

    Conserved Domains (1) summary
    pfam15709
    Location:91 → 601
    DUF4670; Domain of unknown function (DUF4670)

  28. XM_006496110.5 → XP_006496173.1  uncharacterized protein KIAA2012 homolog isoform X31

    Conserved Domains (1) summary
    pfam15709
    Location:97 → 553
    DUF4670; Domain of unknown function (DUF4670)
Nucleotide Protein Strain
Heading Accession and Version

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