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tmem168.S transmembrane protein 168 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 380542, updated on 4-Nov-2024

Summary

Official Symbol
tmem168.S
Official Full Name
transmembrane protein 168 S homeolog
Primary source
Xenbase:XB-GENE-982332
Locus tag
XELAEV_18021091mg
See related
EnsemblRapid:ENSXLAG00005009729 AllianceGenome:Xenbase:XB-GENE-982332
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
tmem168; flj13576
Summary
Predicted to enable sodium channel regulator activity. Predicted to be located in nuclear membrane. Orthologous to human TMEM168 (transmembrane protein 168). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See tmem168.S in Genome Data Viewer
Location:
chromosome: 3S
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3S NC_054376.1 (81508277..81525320)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3S NC_030729.1 (80046957..80064000)

Chromosome 3S - NC_054376.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121402188 Neighboring gene S-adenosylmethionine sensor upstream of mTORC1 S homeolog Neighboring gene interferon related developmental regulator 1 S homeolog Neighboring gene kinesin-like protein KIFC3

Genomic regions, transcripts, and products

General gene information

Clone Names

  • MGC53845

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables sodium channel regulator activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in nuclear membrane IEA
Inferred from Electronic Annotation
more info
 
located_in nuclear membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001087379.1NP_001080848.1  transmembrane protein 168

    See identical proteins and their annotated locations for NP_001080848.1

    Status: PROVISIONAL

    Source sequence(s)
    BC043897
    UniProtKB/Swiss-Prot
    Q7ZY86
    UniProtKB/TrEMBL
    A0A974HRM6
    Related
    ENSXLAP00005028489.1, ENSXLAT00005029226.1

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054376.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    81508277..81525320
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)