U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

rps19.S ribosomal protein S19 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 380489, updated on 4-Nov-2024

Summary

Official Symbol
rps19.S
Official Full Name
ribosomal protein S19 S homeolog
Primary source
Xenbase:XB-GENE-968803
Locus tag
XELAEV_18003966mg
See related
EnsemblRapid:ENSXLAG00005010634 AllianceGenome:Xenbase:XB-GENE-968803
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
rps19
Summary
Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to act upstream of or within ribosomal small subunit assembly and translation. Predicted to be located in ribosome. Predicted to be part of cytosolic small ribosomal subunit. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia and Diamond-Blackfan anemia 1. Orthologous to human RPS19 (ribosomal protein S19). [provided by Alliance of Genome Resources, Nov 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See rps19.S in Genome Data Viewer
Location:
chromosome: 7S
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7S NC_054384.1 (104058751..104066685)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) Unplaced Scaffold NW_016694854.1 (880865..888917, complement)

Chromosome 7S - NC_054384.1Genomic Context describing neighboring genes Neighboring gene guanylate-binding protein 1-like Neighboring gene guanylate-binding protein 1 Neighboring gene cell adhesion molecule 4 S homeolog Neighboring gene oocyte zinc finger protein XlCOF26-like

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Clone Names

  • MGC68643

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within ribosomal small subunit assembly IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
ribosomal protein S19 S homeolog

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001087327.1NP_001080796.1  ribosomal protein S19 S homeolog

    See identical proteins and their annotated locations for NP_001080796.1

    Status: PROVISIONAL

    Source sequence(s)
    BC056505
    UniProtKB/TrEMBL
    A0A8J0PR28, A0A974H0B8, A0AA97PYM2, Q6PHL6
    Related
    ENSXLAP00005031383.1, ENSXLAT00005032153.1
    Conserved Domains (1) summary
    pfam01090
    Location:5141
    Ribosomal_S19e; Ribosomal protein S19e

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054384.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    104058751..104066685
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041570384.1XP_041426318.1  ribosomal protein S19 S homeolog isoform X2

    UniProtKB/TrEMBL
    A0A8J0PR28, A0A974H0B8, A0AA97PYM2, Q6PHL6
    Conserved Domains (1) summary
    pfam01090
    Location:5141
    Ribosomal_S19e; Ribosomal protein S19e
  2. XM_018241708.2XP_018097197.1  ribosomal protein S19 S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A310TRG4, A0A974H036, A0AA97PYN5
    Related
    ENSXLAP00005031393.1, ENSXLAT00005032163.1