lztfl1.L leucine zipper transcription factor like 1 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: lztfl1.L
Official Full Name: leucine zipper transcription factor like 1 L homeolog
Primary source: Xenbase:XB-GENE-974892
Locus tag: XELAEV_18031302mg
See related: AllianceGenome:Xenbase:XB-GENE-974892
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: lztfl1
Summary: Predicted to act upstream of or within negative regulation of protein localization to cilium. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in Bardet-Biedl syndrome 17. Orthologous to human LZTFL1 (leucine zipper transcription factor like 1). [provided by Alliance of Genome Resources, Nov 2024]
Annotation information: Annotation category: partial on reference assembly
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Genomic context

Location:: chromosome: 6L

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	6L	NC_054381.1 (68777709..68793944, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	6L	NC_030734.1 (63401685..63417920, complement)

Chromosome 6L - NC_054381.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Process	Evidence Code	Pubs
acts_upstream_of_or_within negative regulation of protein localization to cilium	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: leucine zipper transcription factor like 1 L homeolog

Names: leucine zipper transcription factor-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001087231.1 → NP_001080700.1 leucine zipper transcription factor like 1 L homeolog

See identical proteins and their annotated locations for NP_001080700.1

Status: PROVISIONAL

Source sequence(s)

BC045012

UniProtKB/TrEMBL

Q7ZXF9

Conserved Domains (1) summary

pfam15294
Location:20 → 157

Leu_zip; Leucine zipper

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054381.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

68777709..68793944 complement

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GenBank, FASTA, Sequence Viewer (Graphics)