rpl10.S ribosomal protein L10 S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: rpl10.S
Official Full Name: ribosomal protein L10 S homeolog
Primary source: Xenbase:XB-GENE-970516
Locus tag: XELAEV_18040976mg
See related: EnsemblRapid:ENSXLAG00005020188
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: rpl10; rpl10.L
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Genomic context

Location:: chromosome: 8S

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	8S	NC_054386.1 (76544..80744)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	8S	NC_030739.1 (48029..52239)

Chromosome 8S - NC_054386.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables structural constituent of ribosome	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within ribosomal large subunit assembly	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within translation	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of cytosolic large ribosomal subunit	IEA Inferred from Electronic Annotation more info
part_of ribonucleoprotein complex	IEA Inferred from Electronic Annotation more info
located_in ribosome	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: ribosomal protein L10 S homeolog

Names: ribosomal protein L10 L homeolog

NP_001080666.1

EC 3.6.5.3

XP_018087369.1

EC 3.6.5.3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001087197.2 → NP_001080666.1 ribosomal protein L10 S homeolog

See identical proteins and their annotated locations for NP_001080666.1

Status: PROVISIONAL

Source sequence(s)

BC044716

UniProtKB/TrEMBL

A0A974BP39, A0A974C1N8, Q7ZXK4

Related

ENSXLAP00005059127.1, ENSXLAT00005060566.1

Conserved Domains (1) summary

PTZ00173
Location:1 → 209

PTZ00173; 60S ribosomal protein L10; Provisional

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054386.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

76544..80744

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_018231880.2 → XP_018087369.1 ribosomal protein L10 S homeolog isoform X1

UniProtKB/TrEMBL

A0A974BP39, A0A974C1N8, Q7ZXK4

Conserved Domains (1) summary

PTZ00173
Location:1 → 209

PTZ00173; 60S ribosomal protein L10; Provisional