homer3.L homer scaffold protein 3 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: homer3.L
Official Full Name: homer scaffold protein 3 L homeolog
Primary source: Xenbase:XB-GENE-962127
Locus tag: XELAEV_18006661mg
See related: EnsemblRapid:ENSXLAG00005027550 AllianceGenome:Xenbase:XB-GENE-962127
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: vesl3; homer3; homer-3
Summary: Predicted to enable G protein-coupled glutamate receptor binding activity. Predicted to act upstream of or within G protein-coupled glutamate receptor signaling pathway and regulation of store-operated calcium entry. Predicted to be located in several cellular components, including dendrite; plasma membrane; and postsynaptic density. Orthologous to human HOMER3 (homer scaffold protein 3). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 1L

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	1L	NC_054371.1 (124405342..124476152)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	1L	NC_030724.1 (112151192..112222001)

Chromosome 1L - NC_054371.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables G protein-coupled glutamate receptor binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within G protein-coupled glutamate receptor signaling pathway	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within regulation of store-operated calcium entry	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in dendrite	IEA Inferred from Electronic Annotation more info
located_in plasma membrane	IEA Inferred from Electronic Annotation more info
located_in postsynaptic density	IEA Inferred from Electronic Annotation more info
located_in synapse	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: homer scaffold protein 3 L homeolog

Names: homer homolog 3; homer scaffolding protein 3 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001087155.1 → NP_001080624.1 homer scaffold protein 3 L homeolog

See identical proteins and their annotated locations for NP_001080624.1

Status: PROVISIONAL

Source sequence(s)

BC045262

UniProtKB/TrEMBL

A0A974DZP3, A0A974E002, Q7ZX32

Related

ENSXLAP00005082375.1, ENSXLAT00005084010.1

Conserved Domains (3) summary

cd01206
Location:8 → 116

EVH1_Homer_Vesl; Homer/Vesl family proteins EVH1 domain

pfam06273
Location:271 → 345

eIF-4B; Plant specific eukaryotic initiation factor 4B

pfam10473
Location:218 → 345

CENP-F_leu_zip; Leucine-rich repeats of kinetochore protein Cenp-F/LEK1