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adsl.L adenylosuccinate lyase L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 380285, updated on 18-Sep-2024

Summary

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Official Symbol
adsl.L
Official Full Name
adenylosuccinate lyase L homeolog
Primary source
Xenbase:XB-GENE-1001545
Locus tag
XELAEV_18023676mg
See related
EnsemblRapid:ENSXLAG00005030944
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
adsl
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Genomic context

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See adsl.L in Genome Data Viewer
Location:
chromosome: 4L
Exon count:
14
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4L NC_054377.1 (119761151..119787138)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4L NC_030730.1 (114438727..114464787)

Chromosome 4L - NC_054377.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 83 member F L homeolog Neighboring gene trinucleotide repeat containing 6B L homeolog Neighboring gene small G protein signaling modulator 3 L homeolog Neighboring gene provisional ortholog of chondroadherin L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC53383

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity IEA
Inferred from Electronic Annotation
more info
  
enables N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity IEA
Inferred from Electronic Annotation
more info
  
enables lyase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within 'de novo' AMP biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within 'de novo' IMP biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within purine nucleotide biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within purine ribonucleoside monophosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within purine ribonucleotide biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
adenylosuccinate lyase L homeolog
NP_001080593.1
XP_018111983.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001087124.1 → NP_001080593.1  adenylosuccinate lyase L homeolog

    See identical proteins and their annotated locations for NP_001080593.1

    Status: PROVISIONAL

    Source sequence(s)
    BC044021
    UniProtKB/TrEMBL
    Q7ZY16
    Related
    ENSXLAP00005093086.1, ENSXLAT00005094769.1
    Conserved Domains (2) summary
    cd03302
    Location:36 → 471
    Adenylsuccinate_lyase_2; Adenylsuccinate lyase (ASL)_subgroup 2
    TIGR00928
    Location:36 → 479
    purB; adenylosuccinate lyase

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054377.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    119761151..119787138
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018256494.2 → XP_018111983.1  adenylosuccinate lyase L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8GNT8, A0A974D5J0
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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