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cd2bp2.L CD2 (cytoplasmic tail) binding protein 2 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 380253, updated on 4-Nov-2024

Summary

Official Symbol
cd2bp2.L
Official Full Name
CD2 (cytoplasmic tail) binding protein 2 L homeolog
Primary source
Xenbase:XB-GENE-1016918
Locus tag
XELAEV_18045648mg
See related
EnsemblRapid:ENSXLAG00005033813 AllianceGenome:Xenbase:XB-GENE-1016918
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
cd2bp2
Summary
Predicted to be part of U5 snRNP. Orthologous to human CD2BP2 (CD2 cytoplasmic tail binding protein 2). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See cd2bp2.L in Genome Data Viewer
Location:
chromosome: 9_10L
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10L NC_054387.1 (124790929..124810732)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10L NC_030740.1 (114170772..114190976)

Chromosome 9_10L - NC_054387.1Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 10B L homeolog Neighboring gene CD59 molecule (CD59 blood group) L homeolog Neighboring gene uncharacterized LOC108701721 Neighboring gene salivary glue protein Sgs-3-like

Genomic regions, transcripts, and products

General protein information

Preferred Names
CD2 (cytoplasmic tail) binding protein 2 L homeolog
Names
CD2 antigen (cytoplasmic tail) binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001087092.1NP_001080561.1  CD2 (cytoplasmic tail) binding protein 2 L homeolog

    See identical proteins and their annotated locations for NP_001080561.1

    Status: PROVISIONAL

    Source sequence(s)
    BC108870
    UniProtKB/TrEMBL
    A0A974H4H3, Q32N27
    Related
    ENSXLAP00005100965.1, ENSXLAT00005102932.1
    Conserved Domains (1) summary
    pfam02213
    Location:344399
    GYF; GYF domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    124790929..124810732
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)