gorasp2.L golgi reassembly stacking protein 2 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: gorasp2.L
Official Full Name: golgi reassembly stacking protein 2 L homeolog
Primary source: Xenbase:XB-GENE-943273
Locus tag: XELAEV_18044680mg
See related: EnsemblRapid:ENSXLAG00005034031 AllianceGenome:Xenbase:XB-GENE-943273
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: gorasp2
Summary: Predicted to act upstream of or within Golgi organization. Predicted to be located in Golgi apparatus. Orthologous to human GORASP2 (golgi reassembly stacking protein 2). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 9_10L

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	9_10L	NC_054387.1 (75683192..75694546, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	9_10L	NC_030740.1 (65178480..65189753, complement)

Chromosome 9_10L - NC_054387.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Process	Evidence Code	Pubs
acts_upstream_of_or_within Golgi organization	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in Golgi apparatus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: golgi reassembly stacking protein 2 L homeolog

Names: golgi reassembly stacking protein 2, 55kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001087050.1 → NP_001080519.1 golgi reassembly stacking protein 2 L homeolog

See identical proteins and their annotated locations for NP_001080519.1

Status: PROVISIONAL

Source sequence(s)

BC043840

UniProtKB/TrEMBL

A0A974BZ08, Q7ZYD0

Related

ENSXLAP00005101653.1, ENSXLAT00005103635.1

Conserved Domains (2) summary

pfam04495
Location:69 → 205

GRASP55_65; GRASP55/65 PDZ-like domain

cl00117
Location:14 → 100

PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

75683192..75694546 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_041575509.1 → XP_041431443.1 golgi reassembly stacking protein 2 L homeolog isoform X1

UniProtKB/TrEMBL

A0A8J1LPE4

Related

ENSXLAP00005101688.1, ENSXLAT00005103675.1

Conserved Domains (2) summary

COG5233
Location:119 → 175

GRH1; Peripheral Golgi membrane protein [Intracellular trafficking and secretion]

cl00117
Location:9 → 86

PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...