snap25.S synaptosome associated protein 25kDa S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: snap25.S
Official Full Name: synaptosome associated protein 25kDa S homeolog
Primary source: Xenbase:XB-GENE-948776
Locus tag: XELAEV_18028832mg
See related: EnsemblRapid:ENSXLAG00005024097
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: ric4; sec9; ric-4; snap25; snap-25
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Genomic context

Location:: chromosome: 5S

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	5S	NC_054380.1 (27254888..27304388)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	5S	NC_030733.1 (27333895..27383368)

Chromosome 5S - NC_054380.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables SNAP receptor activity	IEA Inferred from Electronic Annotation more info
enables syntaxin-1 binding	IEA Inferred from Electronic Annotation more info
enables voltage-gated potassium channel activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within exocytosis	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within synaptic vesicle fusion to presynaptic active zone membrane	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within synaptic vesicle priming	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info
located_in neuron projection	IEA Inferred from Electronic Annotation more info
located_in plasma membrane	IEA Inferred from Electronic Annotation more info
located_in synapse	IEA Inferred from Electronic Annotation more info
part_of synaptobrevin 2-SNAP-25-syntaxin-1a-complexin I complex	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: synaptosome associated protein 25kDa S homeolog

Names: synaptosomal-associated protein, 25kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001087041.1 → NP_001080510.1 synaptosome associated protein 25kDa S homeolog

See identical proteins and their annotated locations for NP_001080510.1

Status: PROVISIONAL

Source sequence(s)

BC055981

UniProtKB/TrEMBL

A0A974CQX8, Q8AXM1

Related

ENSXLAP00005071415.1, ENSXLAT00005072962.1

Conserved Domains (3) summary

cd15885
Location:143 → 201

SNARE_SNAP25C; C-terminal SNARE motif of SNAP25

cd15894
Location:10 → 82

SNARE_SNAP25N; N-terminal SNARE motif of SNAP25

pfam00835
Location:91 → 141

SNAP-25; SNAP-25 family