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ppib.L peptidylprolyl isomerase B L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 380197, updated on 4-Nov-2024

Summary

Official Symbol
ppib.L
Official Full Name
peptidylprolyl isomerase B L homeolog
Primary source
Xenbase:XB-GENE-855975
Locus tag
XELAEV_18018084mg
See related
EnsemblRapid:ENSXLAG00005036324 AllianceGenome:Xenbase:XB-GENE-855975
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
cypb; ppib; scylp; cyp-s1
Summary
Predicted to enable peptidyl-prolyl cis-trans isomerase activity. Predicted to act upstream of or within protein folding and protein peptidyl-prolyl isomerization. Human ortholog(s) of this gene implicated in osteogenesis imperfecta type 9. Orthologous to human PPIB (peptidylprolyl isomerase B). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See ppib.L in Genome Data Viewer
Location:
chromosome: 3L
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3L NC_054375.1 (100039945..100043132)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3L NC_030728.1 (84733667..84736854)

Chromosome 3L - NC_054375.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108711328 Neighboring gene PCNA clamp associated factor L homeolog Neighboring gene sorting nexin 22 L homeolog Neighboring gene sorting nexin 1 L homeolog

Genomic regions, transcripts, and products

General protein information

Preferred Names
peptidylprolyl isomerase B L homeolog
Names
cyclophilin B
peptidyl-prolyl cis-trans isomerase B
peptidylprolyl isomerase B (cyclophilin B) L homeolog
NP_001080505.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001087036.1NP_001080505.1  peptidylprolyl isomerase B L homeolog

    See identical proteins and their annotated locations for NP_001080505.1

    Status: PROVISIONAL

    Source sequence(s)
    BC054168
    UniProtKB/TrEMBL
    A0A974HTG1, Q7SZ26
    Related
    ENSXLAP00005108669.1, ENSXLAT00005110833.1
    Conserved Domains (1) summary
    cd01926
    Location:44203
    cyclophilin_ABH_like; cyclophilin_ABH_like: Cyclophilin A, B and H-like cyclophilin-type peptidylprolyl cis- trans isomerase (PPIase) domain. This family represents the archetypal cystolic cyclophilin similar to human cyclophilins A, B and H. PPIase is an enzyme which ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    100039945..100043132
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)