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gfpt2.L glutamine-fructose-6-phosphate transaminase 2 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 380175, updated on 17-Aug-2024

Summary

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Official Symbol
gfpt2.L
Official Full Name
glutamine-fructose-6-phosphate transaminase 2 L homeolog
Primary source
Xenbase:XB-GENE-6256578
Locus tag
XELAEV_18018545mg
See related
EnsemblRapid:ENSXLAG00005001098
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
gfpt1; gfpt2
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Genomic context

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Location:
chromosome: 3L
Exon count:
20
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3L NC_054375.1 (130011180..130044348)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3L NC_030728.1 (114619857..114653020)

Chromosome 3L - NC_054375.1Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase assembly factor 6 L homeolog Neighboring gene NFU1 iron-sulfur cluster scaffold L homeolog Neighboring gene ANTXR cell adhesion molecule 1 L homeolog Neighboring gene uncharacterized LOC108711548 Neighboring gene gastrokine-1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC53126

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables carbohydrate derivative binding IEA
Inferred from Electronic Annotation
more info
  
enables glutamine-fructose-6-phosphate transaminase (isomerizing) activity IEA
Inferred from Electronic Annotation
more info
  
enables transferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within UDP-N-acetylglucosamine biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within carbohydrate derivative biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within glutamine metabolic process IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
glutamine-fructose-6-phosphate transaminase 2 L homeolog
Names
glutamine fructose-6-phosphate transaminase 1
NP_001080483.1
XP_041440890.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001087014.1 → NP_001080483.1  glutamine-fructose-6-phosphate transaminase 2 L homeolog

    See identical proteins and their annotated locations for NP_001080483.1

    Status: PROVISIONAL

    Source sequence(s)
    BC043809
    UniProtKB/TrEMBL
    A0A974D6V1, A0A974DFG1, Q7ZYF4
    Related
    ENSXLAP00005003318.1, ENSXLAT00005003380.1
    Conserved Domains (4) summary
    PLN02981
    Location:1 → 681
    PLN02981; glucosamine:fructose-6-phosphate aminotransferase
    cd00714
    Location:2 → 284
    GFAT; Glutamine amidotransferases class-II (Gn-AT)_GFAT-type. This domain is found at the N-terminus of glucosamine-6P synthase (GlmS, or GFAT in humans). The glutaminase domain catalyzes amide nitrogen transfer from glutamine to the appropriate substrate. In ...
    cd05008
    Location:368 → 493
    SIS_GlmS_GlmD_1; SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal ...
    cd05009
    Location:525 → 679
    SIS_GlmS_GlmD_2; SIS (Sugar ISomerase) domain repeat 2 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    130011180..130044348
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041584956.1 → XP_041440890.1  glutamine-fructose-6-phosphate transaminase 2 L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A8J1MIK3, A0A974D6V1
    Related
    ENSXLAP00005003315.1, ENSXLAT00005003377.1
    Conserved Domains (1) summary
    PLN02981
    Location:1 → 698
    PLN02981; glucosamine:fructose-6-phosphate aminotransferase
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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