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ckmt1b.S creatine kinase, mitochondrial 1B S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 380155, updated on 4-Nov-2024

Summary

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Official Symbol
ckmt1b.S
Official Full Name
creatine kinase, mitochondrial 1B S homeolog
Primary source
Xenbase:XB-GENE-6254065
Locus tag
XELAEV_18020560mg
See related
EnsemblRapid:ENSXLAG00005013757 AllianceGenome:Xenbase:XB-GENE-6254065
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
ckmt; ckmt1; umtck; ckmt1b-a; ckmt1b-b; ckmt1b.L
Summary
Predicted to enable ATP binding activity and creatine kinase activity. Predicted to act upstream of or within phosphocreatine biosynthetic process and phosphorylation. Predicted to be located in mitochondrial inner membrane. Is expressed in endoderm and nervous system. Orthologous to human CKMT1B (creatine kinase, mitochondrial 1B). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See ckmt1b.S in Genome Data Viewer
Location:
chromosome: 3S
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3S NC_054376.1 (47038906..47086648, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3S NC_030729.1 (45764935..45795390, complement)

Chromosome 3S - NC_054376.1Genomic Context describing neighboring genes Neighboring gene protein disulfide isomerase family A member 3 S homeolog Neighboring gene solute carrier family 39 member 1 like S homeolog Neighboring gene uncharacterized LOC121402154 Neighboring gene diphosphoinositol pentakisphosphate kinase 1 S homeolog Neighboring gene microtubule associated protein 1A S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC53300

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables creatine kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within phosphocreatine biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within phosphorylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
  
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
creatine kinase, mitochondrial 1B S homeolog
Names
Creatine kinase B
creatine kinase, mitochondrial 1 (ubiquitous)
creatine kinase, mitochondrial 1B L homeolog
NP_001080463.1
XP_018109560.1
XP_041443437.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001086994.1 → NP_001080463.1  creatine kinase, mitochondrial 1B S homeolog

    See identical proteins and their annotated locations for NP_001080463.1

    Status: PROVISIONAL

    Source sequence(s)
    BC045123
    UniProtKB/TrEMBL
    A0A974HQS5, Q7ZX84
    Conserved Domains (1) summary
    cd00716
    Location:50 → 407
    creatine_kinase_like; Phosphagen (guanidino) kinases such as creatine kinase and similar enzymes

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054376.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    47038906..47086648 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041587503.1 → XP_041443437.1  creatine kinase, mitochondrial 1B S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8GST7, A0A974D9X0
    Related
    ENSXLAP00005040604.1, ENSXLAT00005041525.1
    Conserved Domains (1) summary
    cd00716
    Location:79 → 436
    creatine_kinase_like; Phosphagen (guanidino) kinases such as creatine kinase and similar enzymes

  2. XM_018254071.2 → XP_018109560.1  creatine kinase, mitochondrial 1B S homeolog isoform X2

    UniProtKB/TrEMBL
    A0A974HQS5, Q7ZX84
    Conserved Domains (1) summary
    cd00716
    Location:50 → 407
    creatine_kinase_like; Phosphagen (guanidino) kinases such as creatine kinase and similar enzymes
Nucleotide Protein Strain
Heading Accession and Version

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