psmg2.L proteasome (prosome, macropain) assembly chaperone 2 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: psmg2.L
Official Full Name: proteasome (prosome, macropain) assembly chaperone 2 L homeolog
Primary source: Xenbase:XB-GENE-1003813
Locus tag: XELAEV_18031820mg
See related: EnsemblRapid:ENSXLAG00005010749 AllianceGenome:Xenbase:XB-GENE-1003813
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: psmg2; clast3
Summary: Predicted to act upstream of or within chaperone-mediated protein complex assembly. Predicted to be located in nucleus. Predicted to be part of proteasome complex. Human ortholog(s) of this gene implicated in proteosome-associated autoinflammatory syndrome 4. Orthologous to human PSMG2 (proteasome assembly chaperone 2). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 6L

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	6L	NC_054381.1 (109823615..109839288, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	6L	NC_030734.1 (102904026..102911625, complement)

Chromosome 6L - NC_054381.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Process	Evidence Code	Pubs
acts_upstream_of_or_within chaperone-mediated protein complex assembly	ISS Inferred from Sequence or Structural Similarity more info
acts_upstream_of_or_within proteasome assembly	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytosol	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info
located_in nucleus	ISS Inferred from Sequence or Structural Similarity more info
part_of proteasome complex	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: proteasome assembly chaperone 2

Names: CD40 ligand-activated specific transcript 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001086965.2 → NP_001080434.1 proteasome assembly chaperone 2

See identical proteins and their annotated locations for NP_001080434.1

Status: PROVISIONAL

Source sequence(s)

BC054255

UniProtKB/Swiss-Prot

Q7SYV1

Related

ENSXLAP00005031753.1, ENSXLAT00005032528.1

Conserved Domains (1) summary

pfam09754
Location:17 → 158

PAC2; PAC2 family

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054381.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

109823615..109839288 complement

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GenBank, FASTA, Sequence Viewer (Graphics)