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stk38.S serine/threonine kinase 38 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 380110, updated on 4-Nov-2024

Summary

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Official Symbol
stk38.S
Official Full Name
serine/threonine kinase 38 S homeolog
Primary source
Xenbase:XB-GENE-5742627
Locus tag
XELAEV_18014684mg
See related
EnsemblRapid:ENSXLAG00005031661 AllianceGenome:Xenbase:XB-GENE-5742627
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
trc; NDR1; stk38; stk38.L
Summary
Predicted to enable ATP binding activity and protein serine/threonine kinase activity. Predicted to act upstream of or within intracellular signal transduction and peptidyl-serine phosphorylation. Orthologous to human STK38 (serine/threonine kinase 38). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See stk38.S in Genome Data Viewer
Location:
chromosome: 2S
Exon count:
14
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2S NC_054374.1 (45108272..45142394, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2S NC_030727.1 (42270882..42305377, complement)

Chromosome 2S - NC_054374.1Genomic Context describing neighboring genes Neighboring gene transcription factor ETV7-like Neighboring gene uncharacterized LOC121400513 Neighboring gene uncharacterized LOC108709394 Neighboring gene nuclear receptor subfamily 1, group H, member 5 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Binding of Kif23-iso1/CHO1 to 14-3-3 is regulated by sequential phosphorylations at two LATS kinase consensus sites. Fesquet D, et al. PLoS One, 2015. PMID 25658096, Free PMC Article
  2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Clone Names

  • MGC69164

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within peptidyl-serine phosphorylation IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within phosphorylation IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein phosphorylation IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
serine/threonine kinase 38 S homeolog
Names
nuclear DBF2-related kinase 1
serine/threonine kinase 38 L homeolog
tricornered
NP_001080418.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001086949.1 → NP_001080418.1  serine/threonine kinase 38 S homeolog

    See identical proteins and their annotated locations for NP_001080418.1

    Status: PROVISIONAL

    Source sequence(s)
    BC056129
    UniProtKB/TrEMBL
    A0A974HV90, Q7T0M1
    Related
    ENSXLAP00005094965.1, ENSXLAT00005096682.1
    Conserved Domains (2) summary
    smart00220
    Location:89 → 382
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cl21453
    Location:87 → 462
    PKc_like; Protein Kinases, catalytic domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054374.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    45108272..45142394 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials