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yipf5.S Yip1 domain family member 5 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 380087, updated on 18-Sep-2024

Summary

Official Symbol
yipf5.S
Official Full Name
Yip1 domain family member 5 S homeolog
Primary source
Xenbase:XB-GENE-977468
Locus tag
XELAEV_18021455mg
See related
EnsemblRapid:ENSXLAG00005013448
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
yipf5; smap-5
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Genomic context

See yipf5.S in Genome Data Viewer
Location:
chromosome: 3S
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3S NC_054376.1 (108259922..108276502)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3S NC_030729.1 (106335026..106351980)

Chromosome 3S - NC_054376.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121402215 Neighboring gene potassium channel tetramerization domain containing 16 S homeolog Neighboring gene uncharacterized LOC121402216 Neighboring gene nuclear receptor subfamily 3 group C member 1 S homeolog Neighboring gene Rho GTPase activating protein 26 S homeolog

Genomic regions, transcripts, and products

General protein information

Preferred Names
protein YIPF5
Names
YIP1 family member 5
Yip1 domain family, member 5
golgi membrane protein SB140

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001086926.1NP_001080395.1  protein YIPF5

    See identical proteins and their annotated locations for NP_001080395.1

    Status: PROVISIONAL

    Source sequence(s)
    BC055267
    UniProtKB/Swiss-Prot
    Q7SXS2
    Related
    ENSXLAP00005039673.1, ENSXLAT00005040594.1
    Conserved Domains (1) summary
    cl21557
    Location:74256
    Yip1; Yip1 domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054376.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    108259922..108276502
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018254070.2XP_018109559.1  protein YIPF5 isoform X1

    UniProtKB/TrEMBL
    A0A1L8GV85, A0A974D9I3
    Related
    ENSXLAP00005039685.1, ENSXLAT00005040606.1