U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

atp1b2.L ATPase, Na+/K+ transporting, beta 2 polypeptide L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 380054, updated on 4-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
atp1b2.L
Official Full Name
ATPase, Na+/K+ transporting, beta 2 polypeptide L homeolog
Primary source
Xenbase:XB-GENE-17335146
Locus tag
XELAEV_18019679mg
See related
EnsemblRapid:ENSXLAG00005021682 AllianceGenome:Xenbase:XB-GENE-17335146
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
atp1b2
Summary
Predicted to enable ATPase activator activity and hydrolase activity. Predicted to act upstream of or within intracellular monoatomic cation homeostasis and monoatomic cation transmembrane transport. Predicted to be located in membrane. Predicted to be part of sodium:potassium-exchanging ATPase complex. Orthologous to human ATP1B2 (ATPase Na+/K+ transporting subunit beta 2). [provided by Alliance of Genome Resources, Nov 2024]
Annotation information
Annotation category: partial on reference assembly
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See atp1b2.L in Genome Data Viewer
Location:
chromosome: 3L
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3L NC_054375.1 (161244388..161249510, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3L NC_030728.1 (144039461..144044767, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) Unplaced Scaffold NW_016719014.1 (185..574)

Chromosome 3L - NC_054375.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 16 member 13 L homeolog Neighboring gene tumor protein p53 L homeolog Neighboring gene uncharacterized LOC108711841 Neighboring gene RNA polymerase II subunit A L homeolog

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Xenopus Na,K-ATPase: primary sequence of the beta2 subunit and in situ localization of alpha1, beta1, and gamma expression during pronephric kidney development. Eid SR, et al. Differentiation, 2001 Sep. PMID 11686233
  2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Clone Names

  • MGC52526, MGC82363

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within intracellular potassium ion homeostasis IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within intracellular sodium ion homeostasis IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within potassium ion import across plasma membrane IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within potassium ion transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within sodium ion export across plasma membrane IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within sodium ion transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
part_of sodium:potassium-exchanging ATPase complex IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
Na+/K+ -ATPase beta 2 subunit
NP_001080362.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001086893.1 → NP_001080362.1  Na+/K+ -ATPase beta 2 subunit

    See identical proteins and their annotated locations for NP_001080362.1

    Status: PROVISIONAL

    Source sequence(s)
    AJ293961
    UniProtKB/TrEMBL
    Q7ZX09, Q9DEN5
    Related
    ENSXLAP00005063557.1, ENSXLAT00005065069.1
    Conserved Domains (1) summary
    pfam00287
    Location:12 → 293
    Na_K-ATPase; Sodium / potassium ATPase beta chain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    161244388..161249510 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.