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wsb1.L WD repeat and SOCS box containing 1 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 380049, updated on 18-Sep-2024

Summary

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Official Symbol
wsb1.L
Official Full Name
WD repeat and SOCS box containing 1 L homeolog
Primary source
Xenbase:XB-GENE-5920544
Locus tag
XELAEV_18012853mg
See related
EnsemblRapid:ENSXLAG00005002479
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
wsb1
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Genomic context

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See wsb1.L in Genome Data Viewer
Location:
chromosome: 2L
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2L NC_054373.1 (107839014..107856647, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2L NC_030726.1 (102922831..102940539)

Chromosome 2L - NC_054373.1Genomic Context describing neighboring genes Neighboring gene lectin, galactoside-binding, soluble, 9C L homeolog Neighboring gene kinase suppressor of ras 1 L homeolog Neighboring gene neurofibromin 1 L homeolog Neighboring gene ecotropic viral integration site 2A L homeolog Neighboring gene oligodendrocyte myelin glycoprotein L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC53424

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein ubiquitination IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
WD repeat and SOCS box containing 1 L homeolog; WD repeat and SOCS box-containing protein 1
Names
SOCS box-containing WD protein SWiP-1
WD repeat and SOCS box-containing 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054373.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    107839014..107856647 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018244815.2 → XP_018100304.1  WD repeat and SOCS box-containing protein 1

    UniProtKB/TrEMBL
    A0A1L8HGG6, A0A974DNF0
    Related
    ENSXLAP00005007450.1, ENSXLAT00005007559.1

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001086888.1: Suppressed sequence

    Description
    NM_001086888.1: This RefSeq was removed because it is a nonsense-mediated mRNA decay (NMD) candidate.
Nucleotide Protein Strain
Heading Accession and Version

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