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prr5.L proline rich 5 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 380036, updated on 18-Sep-2024

Summary

Official Symbol
prr5.L
Official Full Name
proline rich 5 L homeolog
Primary source
Xenbase:XB-GENE-5918844
Locus tag
XELAEV_18016678mg
See related
EnsemblRapid:ENSXLAG00005009381
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
prr5; pp610; protor1; protor2
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Genomic context

See prr5.L in Genome Data Viewer
Location:
chromosome: 3L
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3L NC_054375.1 (3412194..3444947, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3L NC_030728.1 (3055878..3094339, complement)

Chromosome 3L - NC_054375.1Genomic Context describing neighboring genes Neighboring gene PHD finger protein 21B L homeolog Neighboring gene Rho GTPase activating protein 8 L homeolog Neighboring gene shisa like 1 L homeolog Neighboring gene gamma-parvin-like

Genomic regions, transcripts, and products

General protein information

Preferred Names
proline-rich protein 5
Names
Protor-2 homolog
proline rich 5 (renal)
protein observed with Rictor-1
protor-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001086875.1NP_001080344.1  proline-rich protein 5

    See identical proteins and their annotated locations for NP_001080344.1

    Status: PROVISIONAL

    Source sequence(s)
    BC042252
    UniProtKB/Swiss-Prot
    Q8AVJ1
    UniProtKB/TrEMBL
    A0A974D9R9
    Related
    ENSXLAP00005027391.1, ENSXLAT00005028123.1
    Conserved Domains (1) summary
    pfam08539
    Location:87156
    HbrB; HbrB-like

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    3412194..3444947 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018250703.2XP_018106192.1  proline-rich protein 5 isoform X2

    UniProtKB/TrEMBL
    A0A8J0UN24, A0A974D9R9
    Related
    ENSXLAP00005027418.1, ENSXLAT00005028150.1
  2. XM_041584954.1XP_041440888.1  proline-rich protein 5 isoform X3

    UniProtKB/TrEMBL
    A0A8J1MH90, A0A974D9R9
    Related
    ENSXLAP00005027357.1, ENSXLAT00005028090.1
  3. XM_041584953.1XP_041440887.1  proline-rich protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A8J1MGP4, A0A974D9R9
    Related
    ENSXLAP00005027375.1, ENSXLAT00005028105.1