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znf330.S zinc finger protein 330 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 380031, updated on 4-Nov-2024

Summary

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Official Symbol
znf330.S
Official Full Name
zinc finger protein 330 S homeolog
Primary source
Xenbase:XB-GENE-1010554
Locus tag
XELAEV_18009272mg
See related
EnsemblRapid:ENSXLAG00005030058 AllianceGenome:Xenbase:XB-GENE-1010554
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
noa36; znf330
Summary
Predicted to enable zinc ion binding activity. Predicted to be located in nucleolus. Orthologous to human ZNF330 (zinc finger protein 330). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See znf330.S in Genome Data Viewer
Location:
chromosome: 1S
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1S NC_054372.1 (48791513..48812347, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1S NC_030725.1 (48470366..48491233, complement)

Chromosome 1S - NC_054372.1Genomic Context describing neighboring genes Neighboring gene type II inositol 3,4-bisphosphate 4-phosphatase Neighboring gene interleukin 15 S homeolog Neighboring gene ring finger protein 150 S homeolog Neighboring gene TBC1 domain family member 9 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Expression of XNOA 36 in the mitochondrial cloud of Xenopus laevis oocytes. Vaccaro MC, et al. Zygote, 2012 Aug. PMID 21492502
  2. A transient asymmetric distribution of XNOA 36 mRNA and the associated spectrin network bisects Xenopus laevis stage I oocytes along the future A/V axis. Vaccaro MC, et al. Eur J Cell Biol, 2010 Jul. PMID 20226562
  3. A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning. Kırlı K, et al. Elife, 2015 Dec 17. PMID 26673895, Free PMC Article
  4. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Clone Names

  • MGC52918

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
zinc finger protein 330 S homeolog
Names
nucleolar cysteine-rich protein
xnoa 36

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001086870.1 → NP_001080339.1  zinc finger protein 330 S homeolog

    See identical proteins and their annotated locations for NP_001080339.1

    Status: PROVISIONAL

    Source sequence(s)
    BC044969
    UniProtKB/TrEMBL
    A0A974I0V2, Q7ZXJ2
    Related
    ENSXLAP00005090014.1, ENSXLAT00005091691.1
    Conserved Domains (1) summary
    pfam06524
    Location:1 → 261
    NOA36; NOA36 protein

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054372.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    48791513..48812347 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018233626.2 → XP_018089115.1  zinc finger protein 330 S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A974I0V2, Q7ZXJ2

  2. XM_018233619.2 → XP_018089108.1  zinc finger protein 330 S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A974I0V2, Q7ZXJ2

  3. XM_018233610.2 → XP_018089099.1  zinc finger protein 330 S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A974I0V2, Q7ZXJ2
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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