ssr3.L signal sequence receptor, gamma (translocon-associated protein gamma) L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: ssr3.L
Official Full Name: signal sequence receptor, gamma (translocon-associated protein gamma) L homeolog
Primary source: Xenbase:XB-GENE-964608
Locus tag: XELAEV_18027671mg
See related: AllianceGenome:Xenbase:XB-GENE-964608
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: ssr3; ssr3a; trapg; ssr3-a; ssr3-b; XTRAP-g; XTRAP-gamma
Summary: Predicted to act upstream of or within SRP-dependent cotranslational protein targeting to membrane. Predicted to be located in endoplasmic reticulum membrane. Orthologous to human SSR3 (signal sequence receptor subunit 3). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 5L

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	5L	NC_054379.1 (124099602..124103738)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	5L	NC_030732.1 (113345406..113349542)

Chromosome 5L - NC_054379.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Process	Evidence Code	Pubs
acts_upstream_of_or_within SRP-dependent cotranslational protein targeting to membrane	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in endoplasmic reticulum	IEA Inferred from Electronic Annotation more info
located_in endoplasmic reticulum membrane	IEA Inferred from Electronic Annotation more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: signal sequence receptor gamma subunit a

Names: signal sequence receptor, gamma (translocon-associated protein gamma) a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001086847.1 → NP_001080316.1 signal sequence receptor gamma subunit a

See identical proteins and their annotated locations for NP_001080316.1

Status: PROVISIONAL

Source sequence(s)

BC041301

UniProtKB/TrEMBL

A0A974CYK4, Q7ZYT1

Conserved Domains (1) summary

pfam07074
Location:12 → 183

TRAP-gamma; Translocon-associated protein, gamma subunit (TRAP-gamma)