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cndp2.S CNDP dipeptidase 2 (metallopeptidase M20 family) S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 380001, updated on 4-Nov-2024

Summary

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Official Symbol
cndp2.S
Official Full Name
CNDP dipeptidase 2 (metallopeptidase M20 family) S homeolog
Primary source
Xenbase:XB-GENE-962331
Locus tag
XELAEV_18033544mg
See related
EnsemblRapid:ENSXLAG00005016022 AllianceGenome:Xenbase:XB-GENE-962331
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
cn2; cpgl; cndp2; cndp2b; darmin-r
Summary
Predicted to enable carboxypeptidase activity; metal ion binding activity; and metallodipeptidase activity. Predicted to act upstream of or within proteolysis. Predicted to be located in cytosol. Is expressed in urinary system and visual system. Orthologous to human CNDP2 (carnosine dipeptidase 2). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See cndp2.S in Genome Data Viewer
Location:
chromosome: 6S
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 6S NC_054382.1 (86549899..86564272)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 6S NC_030735.1 (78279959..78294340)

Chromosome 6S - NC_054382.1Genomic Context describing neighboring genes Neighboring gene carnosine dipeptidase 1 (metallopeptidase M20 family) S homeolog Neighboring gene divergent protein kinase domain 1C S homeolog Neighboring gene traf2 and NCK-interacting protein kinase-like S homeolog Neighboring gene cytochrome b5 type A (microsomal) S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC69047

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables carboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
  
enables dipeptidase activity IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables metallodipeptidase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within proteolysis IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in cytosol IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
CNDP dipeptidase 2 b
Names
CNDP dipeptidase 2 (metallopeptidase M20 family) b
cytosolic nonspecific dipeptidase
darmin-related
NP_001080309.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001086840.1 → NP_001080309.1  CNDP dipeptidase 2 b

    See identical proteins and their annotated locations for NP_001080309.1

    Status: PROVISIONAL

    Source sequence(s)
    BC056069
    UniProtKB/TrEMBL
    A0A974CJF7, Q05AY3, Q7T0R7
    Related
    ENSXLAP00005047192.1, ENSXLAT00005048296.1
    Conserved Domains (2) summary
    PRK08201
    Location:9 → 473
    PRK08201; hypothetical protein; Provisional
    cd05676
    Location:7 → 473
    M20_dipept_like_CNDP; M20 cytosolic nonspecific dipeptidases including anserinase and serum carnosinase

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054382.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    86549899..86564272
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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