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mfsd14a.L major facilitator superfamily domain containing 14A L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 379933, updated on 4-Nov-2024

Summary

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Official Symbol
mfsd14a.L
Official Full Name
major facilitator superfamily domain containing 14A L homeolog
Primary source
Xenbase:XB-GENE-1001421
Locus tag
XELAEV_18023416mg
See related
EnsemblRapid:ENSXLAG00005012894 AllianceGenome:Xenbase:XB-GENE-1001421
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
hiat1; hiat1-a; mfsd14a
Summary
Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Orthologous to human MFSD14A (major facilitator superfamily domain containing 14A). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See mfsd14a.L in Genome Data Viewer
Location:
chromosome: 4L
Exon count:
14
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4L NC_054377.1 (105223620..105246425)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4L NC_030730.1 (99952661..99975429)

Chromosome 4L - NC_054377.1Genomic Context describing neighboring genes Neighboring gene putative ferric-chelate reductase 1 Neighboring gene solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3, gene 1 L homeolog Neighboring gene SAS-6 centriolar assembly protein L homeolog Neighboring gene tRNA methyltransferase 13 homolog (S. cerevisiae) L homeolog Neighboring gene leucine rich repeat containing 39 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC53894

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
major facilitator superfamily domain containing 14A L homeolog
Names
hippocampus abundant gene transcript 1
hippocampus abundant transcript 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001086772.1 → NP_001080241.1  major facilitator superfamily domain containing 14A L homeolog

    See identical proteins and their annotated locations for NP_001080241.1

    Status: PROVISIONAL

    Source sequence(s)
    BC046748
    UniProtKB/TrEMBL
    A0A974D542, Q7ZWR0
    Related
    ENSXLAP00005037966.1, ENSXLAT00005038875.1
    Conserved Domains (2) summary
    cd06174
    Location:39 → 396
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    pfam07690
    Location:41 → 385
    MFS_1; Major Facilitator Superfamily

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054377.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    105223620..105246425
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018256476.2 → XP_018111965.1  major facilitator superfamily domain containing 14A L homeolog isoform X2

    UniProtKB/TrEMBL
    A0A974D542, Q7ZWR0

  2. XM_041589156.1 → XP_041445090.1  major facilitator superfamily domain containing 14A L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A8J1MVN9
    Related
    ENSXLAP00005037977.1, ENSXLAT00005038889.1
    Conserved Domains (1) summary
    cd17387
    Location:82 → 493
    MFS_MFSD14; Major facilitator superfamily domain-containing 14A and 14B
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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