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gpsm2.S G-protein signaling modulator 2 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 379843, updated on 17-Aug-2024

Summary

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Official Symbol
gpsm2.S
Official Full Name
G-protein signaling modulator 2 S homeolog
Primary source
Xenbase:XB-GENE-6254684
Locus tag
XELAEV_18025504mg
See related
EnsemblRapid:ENSXLAG00005005879
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
lgn; pins; gpsm2; dfnb82; gpsm2.L
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Genomic context

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Location:
chromosome: 4S
Exon count:
17
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4S NC_054378.1 (91204527..91238622, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4S NC_030731.1 (84870690..84904778, complement)

Chromosome 4S - NC_054378.1Genomic Context describing neighboring genes Neighboring gene calmodulin regulated spectrin associated protein family member 2 S homeolog Neighboring gene chloride channel CLIC-like 1 S homeolog Neighboring gene syntaxin binding protein 3 S homeolog Neighboring gene uncharacterized LOC121393336 Neighboring gene fibronectin type III domain containing 7 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC52811

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables GTPase regulator activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
G-protein signaling modulator 2 S homeolog
Names
G-protein signaling modulator 2 (AGS3-like)
G-protein signaling modulator 2 (AGS3-like, C. elegans)
G-protein signaling modulator 2 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001086682.1 → NP_001080151.1  G-protein signaling modulator 2 S homeolog

    See identical proteins and their annotated locations for NP_001080151.1

    Status: PROVISIONAL

    Source sequence(s)
    BC041257
    UniProtKB/TrEMBL
    Q8AVU7
    Related
    ENSXLAP00005017550.1, ENSXLAT00005017846.1
    Conserved Domains (4) summary
    sd00006
    Location:224 → 251
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:224 → 255
    TPR_1; Tetratricopeptide repeat
    pfam13176
    Location:265 → 299
    TPR_7; Tetratricopeptide repeat
    pfam13424
    Location:184 → 255
    TPR_12; Tetratricopeptide repeat

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054378.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    91204527..91238622 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018259374.2 → XP_018114863.1  G-protein signaling modulator 2 S homeolog isoform X5

    UniProtKB/TrEMBL
    A0A8J0UZC0

  2. XM_018259369.2 → XP_018114858.1  G-protein signaling modulator 2 S homeolog isoform X2

    UniProtKB/TrEMBL
    A0A8J0UZB3

  3. XM_018259368.2 → XP_018114857.1  G-protein signaling modulator 2 S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A8J0V447

  4. XM_018259372.2 → XP_018114861.1  G-protein signaling modulator 2 S homeolog isoform X4

    UniProtKB/TrEMBL
    A0A1L8GGK1, A0A974HLY1

  5. XM_018259371.2 → XP_018114860.1  G-protein signaling modulator 2 S homeolog isoform X4

    UniProtKB/TrEMBL
    A0A1L8GGK1, A0A974HLY1
    Related
    ENSXLAP00005017563.1, ENSXLAT00005017859.1

  6. XM_018259370.2 → XP_018114859.1  G-protein signaling modulator 2 S homeolog isoform X3

    UniProtKB/TrEMBL
    A0A8J0V3B4
    Related
    ENSXLAP00005017542.1, ENSXLAT00005017838.1
Nucleotide Protein Strain
Heading Accession and Version

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