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aimp1.S aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 379802, updated on 17-Aug-2024

Summary

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Official Symbol
aimp1.S
Official Full Name
aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 S homeolog
Primary source
Xenbase:XB-GENE-958447
Locus tag
XELAEV_18009395mg
See related
EnsemblRapid:ENSXLAG00005003519
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
aimp1; scye1
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Genomic context

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Location:
chromosome: 1S
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1S NC_054372.1 (60802117..60834320, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1S NC_030725.1 (60336495..60368706, complement)

Chromosome 1S - NC_054372.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor kinase 5-like Neighboring gene GTPase IMAP family member GIMD1 Neighboring gene TBC domain-containing protein kinase-like protein Neighboring gene uncharacterized LOC121399311

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC53472

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables aminoacyl-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
  
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 S homeolog
Names
small inducible cytokine subfamily E, member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001086641.1 → NP_001080110.1  aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 S homeolog

    See identical proteins and their annotated locations for NP_001080110.1

    Status: PROVISIONAL

    Source sequence(s)
    BC046580
    UniProtKB/TrEMBL
    Q7ZWY7
    Related
    ENSXLAP00005010474.1, ENSXLAT00005010640.1
    Conserved Domains (2) summary
    cd02799
    Location:142 → 244
    tRNA_bind_EMAP-II_like; tRNA-binding-domain-containing EMAP2-like proteins. This family contains a diverse fraction of tRNA binding proteins, including Caenorhabditis elegans methionyl-tRNA synthetase (CeMetRS), human tyrosyl- tRNA synthetase (hTyrRS), Saccharomyces cerevisiae ...
    pfam06005
    Location:4 → 66
    DUF904; Protein of unknown function (DUF904)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054372.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    60802117..60834320 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018233274.2 → XP_018088763.1  aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 S homeolog isoform X3

    UniProtKB/TrEMBL
    A0A1L8HM44, A0A974DSB0
    Conserved Domains (2) summary
    PLN02610
    Location:142 → 304
    PLN02610; probable methionyl-tRNA synthetase
    PRK00252
    Location:22 → 78
    alaS; alanyl-tRNA synthetase; Reviewed

  2. XM_018233258.2 → XP_018088747.1  aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A8J0TR51
    Related
    ENSXLAP00005010491.1, ENSXLAT00005010657.1

  3. XM_041572964.1 → XP_041428898.1  aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 S homeolog isoform X2

    UniProtKB/TrEMBL
    A0A8J1LH62
    Related
    ENSXLAP00005010484.1, ENSXLAT00005010650.1
    Conserved Domains (2) summary
    PLN02610
    Location:156 → 318
    PLN02610; probable methionyl-tRNA synthetase
    PRK00252
    Location:36 → 92
    alaS; alanyl-tRNA synthetase; Reviewed

  4. XM_018233293.2 → XP_018088782.1  aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 S homeolog isoform X3

    UniProtKB/TrEMBL
    A0A1L8HM44, A0A974DSB0
    Conserved Domains (2) summary
    PLN02610
    Location:142 → 304
    PLN02610; probable methionyl-tRNA synthetase
    PRK00252
    Location:22 → 78
    alaS; alanyl-tRNA synthetase; Reviewed

  5. XM_018233284.2 → XP_018088773.1  aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 S homeolog isoform X3

    UniProtKB/TrEMBL
    A0A1L8HM44, A0A974DSB0
    Conserved Domains (2) summary
    PLN02610
    Location:142 → 304
    PLN02610; probable methionyl-tRNA synthetase
    PRK00252
    Location:22 → 78
    alaS; alanyl-tRNA synthetase; Reviewed

  6. XM_041572971.1 → XP_041428905.1  aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 S homeolog isoform X3

    UniProtKB/TrEMBL
    A0A1L8HM44, A0A974DSB0
    Related
    ENSXLAP00005010465.1, ENSXLAT00005010632.1
    Conserved Domains (2) summary
    PLN02610
    Location:142 → 304
    PLN02610; probable methionyl-tRNA synthetase
    PRK00252
    Location:22 → 78
    alaS; alanyl-tRNA synthetase; Reviewed
Nucleotide Protein Strain
Heading Accession and Version

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