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arpc3.L actin related protein 2/3 complex subunit 3 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 379746, updated on 18-Sep-2024

Summary

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Official Symbol
arpc3.L
Official Full Name
actin related protein 2/3 complex subunit 3 L homeolog
Primary source
Xenbase:XB-GENE-494119
Locus tag
XELAEV_18007840mg
See related
EnsemblRapid:ENSXLAG00005027523
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
arpc3; arpc3-b
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Genomic context

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See arpc3.L in Genome Data Viewer
Location:
chromosome: 1L
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1L NC_054371.1 (176619117..176630578, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1L NC_030724.1 (163461119..163472644, complement)

Chromosome 1L - NC_054371.1Genomic Context describing neighboring genes Neighboring gene ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 L homeolog Neighboring gene anaphase promoting complex subunit 7 L homeolog Neighboring gene GPN-loop GTPase 3 L homeolog Neighboring gene vacuolar protein sorting-associated protein 29 Neighboring gene RAD9 checkpoint clamp component B L homeolog Neighboring gene PTC7 protein phosphatase homolog L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC68983

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
  
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within Arp2/3 complex-mediated actin nucleation IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within regulation of actin filament polymerization IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of Arp2/3 protein complex IEA
Inferred from Electronic Annotation
more info
  
part_of Arp2/3 protein complex ISS
Inferred from Sequence or Structural Similarity
more info
  
located_in cell projection IEA
Inferred from Electronic Annotation
more info
  
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus ISS
Inferred from Sequence or Structural Similarity
more info
  
located_in site of double-strand break ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

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Preferred Names
actin-related protein 2/3 complex subunit 3-B
Names
Actin-related protein 2/3 complex subunit 3-B
actin related protein 2/3 complex, subunit 3, 21kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001086585.1 → NP_001080054.1  actin-related protein 2/3 complex subunit 3-B

    See identical proteins and their annotated locations for NP_001080054.1

    Status: PROVISIONAL

    Source sequence(s)
    BC056034
    UniProtKB/Swiss-Prot
    Q7T0U5
    UniProtKB/TrEMBL
    A0A974HFX8
    Related
    ENSXLAP00005081857.1, ENSXLAT00005083468.1
    Conserved Domains (1) summary
    pfam04062
    Location:1 → 173
    P21-Arc; ARP2/3 complex ARPC3 (21 kDa) subunit

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    176619117..176630578 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041561443.1 → XP_041417377.1  actin-related protein 2/3 complex subunit 3-B isoform X1

    UniProtKB/TrEMBL
    A0A8J1KJ75, A0A974HFX8
    Conserved Domains (1) summary
    pfam04062
    Location:2 → 165
    P21-Arc; ARP2/3 complex ARPC3 (21 kDa) subunit
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q7T0U5.1 GenPept UniProtKB/Swiss-Prot:Q7T0U5

Gene LinkOut

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