cltrn.L collectrin, amino acid transport regulator L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: cltrn.L
Official Full Name: collectrin, amino acid transport regulator L homeolog
Primary source: Xenbase:XB-GENE-865599
Locus tag: XELAEV_18011624mg
See related: EnsemblRapid:ENSXLAG00005033456 AllianceGenome:Xenbase:XB-GENE-865599
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: NX17; nx-17; tmem27; tmem27.L; collectrin
Summary: Predicted to act upstream of or within positive regulation of amino acid transport. Predicted to be located in extracellular exosome and plasma membrane. Is expressed in urinary system and vestibuloauditory system. Orthologous to human CLTRN (collectrin, amino acid transport regulator). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 2L

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	2L	NC_054373.1 (28963741..28998552)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	2L	NC_030726.1 (28753729..28796716)

Chromosome 2L - NC_054373.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by Xenbase

Process	Evidence Code	Pubs
acts_upstream_of_or_within positive regulation of amino acid transport	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in extracellular exosome	IEA Inferred from Electronic Annotation more info
located_in membrane	IEA Inferred from Electronic Annotation more info
located_in plasma membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: collectrin, amino acid transport regulator L homeolog

Names: kidney-specific membrane protein; transmembrane protein 27 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.