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septin12.S septin 12 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 379651, updated on 18-Sep-2024

Summary

Official Symbol
septin12.S
Official Full Name
septin 12 S homeolog
Primary source
Xenbase:XB-GENE-6079199
Locus tag
XELAEV_18047834mg
See related
EnsemblRapid:ENSXLAG00005008805
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
sept12; sept12.L; sept12.S
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Genomic context

See septin12.S in Genome Data Viewer
Location:
chromosome: 9_10S
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10S NC_054388.1 (107697419..107782312)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10S NC_030741.1 (101034374..101120097)

Chromosome 9_10S - NC_054388.1Genomic Context describing neighboring genes Neighboring gene small integral membrane protein 22 S homeolog Neighboring gene provisional ortholog of galanin receptor 2 S homeolog Neighboring gene myeloid-associated differentiation marker-like protein 2 Neighboring gene cytoplasmic phosphatidylinositol transfer protein 1

Genomic regions, transcripts, and products

General gene information

Clone Names

  • MGC68931

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within cytoskeleton-dependent cytokinesis IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cell division site IEA
Inferred from Electronic Annotation
more info
 
located_in microtubule cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
part_of septin complex IEA
Inferred from Electronic Annotation
more info
 
located_in septin ring IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
septin 12 S homeolog
Names
septin 12 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001086491.1NP_001079960.1  septin 12 S homeolog

    See identical proteins and their annotated locations for NP_001079960.1

    Status: PROVISIONAL

    Source sequence(s)
    BC057732
    UniProtKB/TrEMBL
    Q6PF46
    Related
    ENSXLAP00005025587.1, ENSXLAT00005026298.1
    Conserved Domains (1) summary
    cd01850
    Location:46316
    CDC_Septin; CDC/Septin GTPase family

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054388.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    107697419..107782312
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018237202.2XP_018092691.1  septin 12 S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A8J0TQ02
    Related
    ENSXLAP00005025661.1, ENSXLAT00005026373.1
  2. XM_041577625.1XP_041433559.1  septin 12 S homeolog isoform X3

    UniProtKB/TrEMBL
    A0A8J1LW11
    Conserved Domains (1) summary
    cd01850
    Location:78348
    CDC_Septin; CDC/Septin GTPase family
  3. XM_018237203.2XP_018092692.1  septin 12 S homeolog isoform X2

    UniProtKB/TrEMBL
    A0A8J0TXD3
    Related
    ENSXLAP00005025647.1, ENSXLAT00005026359.1