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ina.L internexin neuronal intermediate filament protein alpha L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 379642, updated on 18-Sep-2024

Summary

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Official Symbol
ina.L
Official Full Name
internexin neuronal intermediate filament protein alpha L homeolog
Primary source
Xenbase:XB-GENE-17330258
Locus tag
XELAEV_18003911mg
See related
EnsemblRapid:ENSXLAG00005014567
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
nifa; xina; ina-a; inexa; xefiltin
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Genomic context

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See ina.L in Genome Data Viewer
Location:
chromosome: 7L
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7L NC_054383.1 (24039659..24052454, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) Unplaced Scaffold NW_016694852.1 (751522..764576)

Chromosome 7L - NC_054383.1Genomic Context describing neighboring genes Neighboring gene protein RRP5 homolog Neighboring gene polycomb group ring finger 6 L homeolog Neighboring gene ubiquitin carboxyl-terminal hydrolase 17-like protein D Neighboring gene ubiquitin carboxyl-terminal hydrolase 17-like protein 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC68885

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables structural constituent of postsynaptic intermediate filament cytoskeleton IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within intermediate filament organization IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in intermediate filament IEA
Inferred from Electronic Annotation
more info
  
located_in postsynaptic intermediate filament cytoskeleton IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein LOC379642

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001086482.1 → NP_001079951.1  uncharacterized protein LOC379642

    See identical proteins and their annotated locations for NP_001079951.1

    Status: PREDICTED

    Source sequence(s)
    BC057721
    UniProtKB/TrEMBL
    A0A974H0C1, Q6PF56
    Related
    ENSXLAP00005042625.1, ENSXLAT00005043692.1
    Conserved Domains (2) summary
    pfam00038
    Location:86 → 396
    Filament; Intermediate filament protein
    pfam04732
    Location:8 → 85
    Filament_head; Intermediate filament head (DNA binding) region

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054383.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    24039659..24052454 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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