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psmb7.2.L proteasome subunit beta 7 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 379551, updated on 17-Aug-2024

Summary

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Official Symbol
psmb7.2.L
Official Full Name
proteasome subunit beta 7 L homeolog
Primary source
Xenbase:XB-GENE-865297
Locus tag
XELAEV_18039157mg
See related
EnsemblRapid:ENSXLAG00005024394
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
psmb7.2
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Genomic context

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See psmb7.2.L in Genome Data Viewer
Location:
chromosome: 8L
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8L NC_054385.1 (65234541..65249683)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 8L NC_030738.1 (51737261..51752407)

Chromosome 8L - NC_054385.1Genomic Context describing neighboring genes Neighboring gene EGF like domain multiple 8 L homeolog Neighboring gene complement C4A (Rodgers blood group) L homeolog Neighboring gene centromere protein A L homeolog Neighboring gene cytochrome P450 family 21 subfamily A member 2, gene 1 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC68991

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables threonine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within proteolysis involved in protein catabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  
part_of proteasome complex IEA
Inferred from Electronic Annotation
more info
  
part_of proteasome core complex IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
proteasome subunit beta 7 L homeolog
Names
proteasome (prosome, macropain) subunit, beta type, 7, gene 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001086392.1 → NP_001079861.1  proteasome subunit beta 7 L homeolog

    See identical proteins and their annotated locations for NP_001079861.1

    Status: PROVISIONAL

    Source sequence(s)
    BC056039
    UniProtKB/TrEMBL
    A0A974C793, A0A974H6H6, Q7T0U0
    Related
    ENSXLAP00005072281.1, ENSXLAT00005073828.1
    Conserved Domains (3) summary
    COG0638
    Location:42 → 226
    PRE1; 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones]
    cd03763
    Location:45 → 233
    proteasome_beta_type_7; proteasome beta type-7 subunit. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that ...
    pfam12465
    Location:239 → 270
    Pr_beta_C; Proteasome beta subunits C terminal

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054385.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    65234541..65249683
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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