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golm2.L golgi membrane protein 2 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 379533, updated on 17-Aug-2024

Summary

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Official Symbol
golm2.L
Official Full Name
golgi membrane protein 2 L homeolog
Primary source
Xenbase:XB-GENE-6255485
Locus tag
XELAEV_18018487mg
See related
EnsemblRapid:ENSXLAG00005001209
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
casc4; golm2; casc4.L
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Genomic context

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Location:
chromosome: 3L
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3L NC_054375.1 (124988981..125008311, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3L NC_030728.1 (109591953..109611317, complement)

Chromosome 3L - NC_054375.1Genomic Context describing neighboring genes Neighboring gene putative stereocilin-like protein Neighboring gene CTD small phosphatase like 2 L homeolog Neighboring gene FERM domain containing 5 L homeolog Neighboring gene Bloom syndrome RecQ like helicase L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC68898, MGC132341

Gene Ontology Provided by Xenbase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
protein GOLM2
Names
cancer susceptibility 4 L homeolog
cancer susceptibility candidate 4 L homeolog
cancer susceptibility candidate gene 4 protein homolog
protein casc4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001086374.1 → NP_001079843.1  protein GOLM2

    See identical proteins and their annotated locations for NP_001079843.1

    Status: PROVISIONAL

    Source sequence(s)
    BC108864
    UniProtKB/Swiss-Prot
    Q32N32, Q7T0X8
    UniProtKB/TrEMBL
    A0A974DD37
    Related
    ENSXLAP00005003696.1, ENSXLAT00005003758.1
    Conserved Domains (1) summary
    cl19219
    Location:119 → 216
    DUF342; Protein of unknown function (DUF342)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    124988981..125008311 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018250653.2 → XP_018106142.1  protein GOLM2 isoform X1

    UniProtKB/TrEMBL
    A0A1L8H1A1, A0A974DD37, A0A974DDK8
    Related
    ENSXLAP00005003691.1, ENSXLAT00005003753.1

  2. XM_018250654.2 → XP_018106143.1  protein GOLM2 isoform X2

    UniProtKB/TrEMBL
    A0A974DD10, A0A974DD37
    Related
    ENSXLAP00005003687.1, ENSXLAT00005003749.1
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q32N32.1 GenPept UniProtKB/Swiss-Prot:Q32N32

Gene LinkOut

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