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mars2.L methionyl-tRNA synthetase 2, mitochondrial L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 379528, updated on 11-Apr-2024

Summary

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Official Symbol
mars2.L
Official Full Name
methionyl-tRNA synthetase 2, mitochondrial L homeolog
Primary source
Xenbase:XB-GENE-5862169
Locus tag
XELAEV_18038545mg
See related
EnsemblRapid:ENSXLAG00005030652
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
mars2; metrs
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Genomic context

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See mars2.L in Genome Data Viewer
Location:
chromosome: 8L
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8L NC_054385.1 (25906760..25911770)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 8L NC_030738.1 (15869778..15874805, complement)

Chromosome 8L - NC_054385.1Genomic Context describing neighboring genes Neighboring gene fatty acid amide hydrolase 2 L homeolog Neighboring gene uncharacterized LOC108698278 Neighboring gene apoptosis inducing factor, mitochondria associated 1 L homeolog Neighboring gene RAB33A, member RAS oncogene family L homeolog Neighboring gene dystrophin related protein 2 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC68850

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables aminoacyl-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
  
enables methionine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within methionyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
  
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
methionine--tRNA ligase, mitochondrial
Names
methionine--tRNA ligase 2
methionyl-tRNA synthetase, mitochondrial
mitochondrial methionine--tRNA ligase
mitochondrial methionyl-tRNA synthetase
mtMetRS
NP_001079838.1
XP_018084095.1
XP_018084096.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001086369.1 → NP_001079838.1  methionine--tRNA ligase, mitochondrial precursor

    See identical proteins and their annotated locations for NP_001079838.1

    Status: PROVISIONAL

    Source sequence(s)
    BC055977
    UniProtKB/Swiss-Prot
    Q7T0Z0
    UniProtKB/TrEMBL
    A0A974H7J4
    Related
    ENSXLAP00005091710.1, ENSXLAT00005093389.1
    Conserved Domains (3) summary
    cd00814
    Location:35 → 371
    MetRS_core; catalytic core domain of methioninyl-tRNA synthetases
    PRK11893
    Location:39 → 557
    PRK11893; methionyl-tRNA synthetase; Reviewed
    cl12020
    Location:380 → 515
    Anticodon_Ia_like; Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054385.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    25906760..25911770
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018228606.2 → XP_018084095.1  methionine--tRNA ligase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8J0THL2, A0A974H7J4

  2. XM_018228607.2 → XP_018084096.1  methionine--tRNA ligase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8J0THL2, A0A974H7J4
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q7T0Z0.1 GenPept UniProtKB/Swiss-Prot:Q7T0Z0

Gene LinkOut

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