lgals1.L lectin, galactoside-binding, soluble, 1, gene 1 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: lgals1.L
Official Full Name: lectin, galactoside-binding, soluble, 1, gene 1 L homeolog
Primary source: Xenbase:XB-GENE-971981
Locus tag: XELAEV_18023711mg
See related: EnsemblRapid:ENSXLAG00005028898
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: lgals1; lgals1.1; lgals1.1.L; Galectin-Ia
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Genomic context

Location:: chromosome: 4L

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	4L	NC_054377.1 (120842066..120846489, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	4L	NC_030730.1 (115521754..115526178, complement)

Chromosome 4L - NC_054377.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables carbohydrate binding	IEA Inferred from Electronic Annotation more info
enables laminin binding	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in collagen-containing extracellular matrix	IEA Inferred from Electronic Annotation more info
located_in extracellular space	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: lectin, galactoside-binding, soluble, 1, gene 1 L homeolog

Names: galectin 1; galectin 1a; lectin, galactoside-binding, soluble, 1 L homeolog; xgalectin-Ia

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001086275.2 → NP_001079744.1 lectin, galactoside-binding, soluble, 1, gene 1 L homeolog

See identical proteins and their annotated locations for NP_001079744.1

Status: PROVISIONAL

Source sequence(s)

BC053816

UniProtKB/TrEMBL

A0A974D177, A0A974D7D8, Q98UD4

Related

ENSXLAP00005086176.1, ENSXLAT00005087838.1

Conserved Domains (1) summary

cd00070
Location:11 → 125

GLECT; Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054377.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

120842066..120846489 complement

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GenBank, FASTA, Sequence Viewer (Graphics)