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smpx.L small muscle protein X-linked L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 379408, updated on 17-Aug-2024

Summary

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Official Symbol
smpx.L
Official Full Name
small muscle protein X-linked L homeolog
Primary source
Xenbase:XB-GENE-865935
Locus tag
XELAEV_18011852mg
See related
EnsemblRapid:ENSXLAG00005013279
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
csl; DFN6; smpx; DFNX4; chisel; zgc:91881
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Genomic context

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Location:
chromosome: 2L
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2L NC_054373.1 (44981172..45024032, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2L NC_030726.1 (43417391..43460165, complement)

Chromosome 2L - NC_054373.1Genomic Context describing neighboring genes Neighboring gene connector enhancer of kinase suppressor of Ras 2 L homeolog Neighboring gene kelch like family member 34 L homeolog Neighboring gene membrane bound transcription factor peptidase, site 2 L homeolog Neighboring gene spermine synthase L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The small muscle-specific protein Csl modifies cell shape and promotes myocyte fusion in an insulin-like growth factor 1-dependent manner. Palmer S, et al. J Cell Biol, 2001 May 28. PMID 11381084, Free PMC Article
  2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
small muscle protein X-linked L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001086252.1 → NP_001079721.1  small muscle protein X-linked L homeolog

    See identical proteins and their annotated locations for NP_001079721.1

    Status: PROVISIONAL

    Source sequence(s)
    AF343894
    UniProtKB/TrEMBL
    A0A974DN20, Q90Z58
    Related
    ENSXLAP00005039184.1, ENSXLAT00005040104.1
    Conserved Domains (1) summary
    pfam15355
    Location:1 → 87
    Chisel; Stretch-responsive small skeletal muscle X protein, Chisel

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054373.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    44981172..45024032 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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