gatm.L glycine amidinotransferase (L-arginine:glycine amidinotransferase) L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: gatm.L
Official Full Name: glycine amidinotransferase (L-arginine:glycine amidinotransferase) L homeolog
Primary source: Xenbase:XB-GENE-974520
Locus tag: XELAEV_18018259mg
See related: EnsemblRapid:ENSXLAG00005001983 AllianceGenome:Xenbase:XB-GENE-974520
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: gatm
Summary: Predicted to enable glycine amidinotransferase activity. Predicted to act upstream of or within creatine biosynthetic process. Predicted to be located in mitochondrial inner membrane. Is expressed in musculoskeletal system; nervous system; and primary germ layer. Human ortholog(s) of this gene implicated in AGAT deficiency and Fanconi renotubular syndrome 1. Orthologous to human GATM (glycine amidinotransferase). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 3L

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	3L	NC_054375.1 (110666632..110688685)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	3L	NC_030728.1 (95219138..95240904)

Chromosome 3L - NC_054375.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables amidinotransferase activity	IEA Inferred from Electronic Annotation more info
enables glycine amidinotransferase activity	IEA Inferred from Electronic Annotation more info
enables glycine amidinotransferase activity	ISS Inferred from Sequence or Structural Similarity more info
enables transferase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within creatine biosynthetic process	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in mitochondrial inner membrane	IEA Inferred from Electronic Annotation more info
located_in mitochondrion	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: glycine amidinotransferase, mitochondrial

NP_001079699.1

EC 2.1.4.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.