lgals3.L lectin, galactoside-binding, soluble, 3 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: lgals3.L
Official Full Name: lectin, galactoside-binding, soluble, 3 L homeolog
Primary source: Xenbase:XB-GENE-983749
Locus tag: XELAEV_18039849mg
See related: EnsemblRapid:ENSXLAG00005036466
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: lgals3; galectin-3; palectin-3
Annotation information: Annotation category: partial on reference assembly
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Genomic context

Location:: chromosome: 8L

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	8L	NC_054385.1 (96400442..96414836, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	8L	NC_030738.1 (81722032..81736436, complement)

Chromosome 8L - NC_054385.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Mutational tuning of galectin-3 specificity and biological function.
Title: Mutational tuning of galectin-3 specificity and biological function.

Submit: New GeneRIF Correction

Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables IgE binding	IEA Inferred from Electronic Annotation more info
enables carbohydrate binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within RNA splicing	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within mRNA processing	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in extracellular region	IEA Inferred from Electronic Annotation more info
part_of spliceosomal complex	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: lectin, galactoside-binding, soluble, 3 L homeolog

Names: galectin 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001086174.1 → NP_001079643.1 lectin, galactoside-binding, soluble, 3 L homeolog

See identical proteins and their annotated locations for NP_001079643.1

Status: PROVISIONAL

Source sequence(s)

AB080020

UniProtKB/TrEMBL

A0A974C8J1, Q7ZSY1

Related

ENSXLAP00005109144.1, ENSXLAT00005111327.1

Conserved Domains (2) summary

smart00908
Location:134 → 254

Gal-bind_lectin; Galactoside-binding lectin

pfam02084
Location:35 → 115

Bindin; Bindin

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054385.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

96400442..96414836 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)