midn.S midnolin S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: midn.S
Official Full Name: midnolin S homeolog
Primary source: Xenbase:XB-GENE-6256089
Locus tag: XELAEV_18009770mg
See related: EnsemblRapid:ENSXLAG00005034166
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: midn; midn-a; midn-b
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Genomic context

Location:: chromosome: 1S

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	1S	NC_054372.1 (90526088..90536374, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	1S	NC_030725.1 (85272748..85282981, complement)

Chromosome 1S - NC_054372.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by Xenbase

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in cytosol	IEA Inferred from Electronic Annotation more info
located_in nucleolus	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: midnolin-B

Names: midbrain nucleolar protein B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001086172.1 → NP_001079641.1 midnolin-B

See identical proteins and their annotated locations for NP_001079641.1

Status: PROVISIONAL

Source sequence(s)

BC046658

UniProtKB/Swiss-Prot

Q3KPP8, Q7ZWX9

UniProtKB/TrEMBL

A0A974DUM7

Related

ENSXLAP00005102049.1, ENSXLAT00005104040.1

Conserved Domains (2) summary

cd01804
Location:19 → 96

midnolin_N; Ubiquitin-like domain of midnolin

smart00213
Location:20 → 88

UBQ; Ubiquitin homologues

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054372.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

90526088..90536374 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_041572803.1 → XP_041428737.1 midnolin-B isoform X1

UniProtKB/TrEMBL

A0A1L8HN73, A0A974DVD5

Conserved Domains (1) summary

cd01804
Location:20 → 89

Ubl_midnolin; ubiquitin-like (Ubl) domain found in midnolin and similar proteins