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slc22a15.2.S solute carrier family 22, member 15, gene 2 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 379308, updated on 17-Aug-2024

Summary

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Official Symbol
slc22a15.2.S
Official Full Name
solute carrier family 22, member 15, gene 2 S homeolog
Primary source
Xenbase:XB-GENE-5824727
Locus tag
XELAEV_18037012mg
See related
EnsemblRapid:ENSXLAG00005024863
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
slc22a15b; slc22a15.2
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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Location:
chromosome: 7S
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7S NC_054384.1 (23618766..23772341, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7S NC_030737.1 (23225058..23378838, complement)

Chromosome 7S - NC_054384.1Genomic Context describing neighboring genes Neighboring gene ATP-dependent translocase ABCB1-like Neighboring gene leucine rich repeat transmembrane neuronal 3 S homeolog Neighboring gene general transcription factor II-I repeat domain-containing protein 2-like Neighboring gene phospholipase C epsilon 1 S homeolog Neighboring gene NOC3-like DNA replication regulator S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC53252

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
solute carrier family 22 member 15-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001086152.1 → NP_001079621.1  solute carrier family 22 member 15-like

    See identical proteins and their annotated locations for NP_001079621.1

    Status: PROVISIONAL

    Source sequence(s)
    BC045234
    UniProtKB/Swiss-Prot
    Q7ZX53
    UniProtKB/TrEMBL
    A0A974CBS4
    Related
    ENSXLAP00005073748.1, ENSXLAT00005075313.1
    Conserved Domains (2) summary
    cd06174
    Location:88 → 455
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    pfam07690
    Location:88 → 423
    MFS_1; Major Facilitator Superfamily

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054384.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    23618766..23772341 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q7ZX53.1 GenPept UniProtKB/Swiss-Prot:Q7ZX53

Gene LinkOut

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Molecular Biology Databases
Research Materials