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nvl.L nuclear VCP like L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 379269, updated on 17-Aug-2024

Summary

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Official Symbol
nvl.L
Official Full Name
nuclear VCP like L homeolog
Primary source
Xenbase:XB-GENE-958004
Locus tag
XELAEV_18026274mg
See related
EnsemblRapid:ENSXLAG00005031580
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
nvl
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Genomic context

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Location:
chromosome: 5L
Exon count:
24
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 5L NC_054379.1 (17243651..17275499, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 5L NC_030732.1 (16544503..16576540, complement)

Chromosome 5L - NC_054379.1Genomic Context describing neighboring genes Neighboring gene delta(4)-desaturase, sphingolipid 1 L homeolog Neighboring gene uncharacterized LOC121393580 Neighboring gene cornichon family member 4 L homeolog Neighboring gene WD repeat domain 26 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC52979

General protein information

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Preferred Names
nuclear VCP like L homeolog; nuclear valosin-containing protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054379.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    17243651..17275499 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041562567.1 → XP_041418501.1  nuclear valosin-containing protein-like

    UniProtKB/TrEMBL
    A0A974CTJ4, Q7ZXI4
    Related
    ENSXLAP00005095142.1, ENSXLAT00005096873.1
    Conserved Domains (2) summary
    TIGR01243
    Location:236 → 854
    CDC48; AAA family ATPase, CDC48 subfamily
    pfam16725
    Location:5 → 72
    Nucleolin_bd; Nucleolin binding domain

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001086113.1: Suppressed sequence

    Description
    NM_001086113.1: This RefSeq was removed because it is a nonsense-mediated mRNA decay (NMD) candidate.
Nucleotide Protein Strain
Heading Accession and Version

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