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susd6.L sushi domain containing 6 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 379245, updated on 4-Nov-2024

Summary

Official Symbol
susd6.L
Official Full Name
sushi domain containing 6 L homeolog
Primary source
Xenbase:XB-GENE-986601
Locus tag
XELAEV_18039971mg
See related
EnsemblRapid:ENSXLAG00005036138 AllianceGenome:Xenbase:XB-GENE-986601
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
susd6; kiaa0247
Summary
Predicted to act upstream of or within DNA damage response. Predicted to be located in membrane. Orthologous to human SUSD6 (sushi domain containing 6). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See susd6.L in Genome Data Viewer
Location:
chromosome: 8L
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8L NC_054385.1 (102133652..102150314)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 8L NC_030738.1 (87445583..87462244)

Chromosome 8L - NC_054385.1Genomic Context describing neighboring genes Neighboring gene pleckstrin homology and coiled-coil domain containing D1 L homeolog Neighboring gene coiled-coil domain containing 177 L homeolog Neighboring gene G protein-coupled receptor 176 L homeolog Neighboring gene cholinergic receptor, muscarinic 5 L homeolog Neighboring gene apoptosis, caspase activation inhibitor L homeolog

Genomic regions, transcripts, and products

General protein information

Preferred Names
sushi domain containing 6 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001086089.1NP_001079558.1  sushi domain containing 6 L homeolog

    See identical proteins and their annotated locations for NP_001079558.1

    Status: PROVISIONAL

    Source sequence(s)
    BC044292
    UniProtKB/TrEMBL
    A0A974C8T7, Q7ZXR1
    Related
    ENSXLAP00005108069.1, ENSXLAT00005110219.1
    Conserved Domains (1) summary
    smart00032
    Location:4098
    CCP; Domain abundant in complement control proteins; SUSHI repeat; short complement-like repeat (SCR)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054385.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    102133652..102150314
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)