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gja7.S gap junction protein, alpha 7, 45kDa (connexin 45) S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 379240, updated on 4-Nov-2024

Summary

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Official Symbol
gja7.S
Official Full Name
gap junction protein, alpha 7, 45kDa (connexin 45) S homeolog
Primary source
Xenbase:XB-GENE-5905192
Locus tag
XELAEV_18046993mg
See related
EnsemblRapid:ENSXLAG00005012717 AllianceGenome:Xenbase:XB-GENE-5905192
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
gja7; gjc1
Summary
Predicted to enable gap junction channel activity. Predicted to act upstream of or within cell-cell signaling. Predicted to be located in gap junction and plasma membrane. Predicted to be part of connexin complex. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See gja7.S in Genome Data Viewer
Location:
chromosome: 9_10S
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10S NC_054388.1 (52479375..52496079, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10S NC_030741.1 (45821469..45838200, complement)

Chromosome 9_10S - NC_054388.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 198-B Neighboring gene uncharacterized LOC100127301 Neighboring gene serine/threonine-protein kinase 11-interacting protein-like Neighboring gene serine/threonine-protein kinase 11-interacting protein-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC53130

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables gap junction channel activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within cell communication IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within cell-cell signaling IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of connexin complex IEA
Inferred from Electronic Annotation
more info
  
located_in gap junction IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
gap junction gamma-1 protein
Names
Gap junction alpha-7 protein
connexin 43.4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001086084.1 → NP_001079553.1  gap junction gamma-1 protein

    See identical proteins and their annotated locations for NP_001079553.1

    Status: PROVISIONAL

    Source sequence(s)
    BC044270
    UniProtKB/Swiss-Prot
    Q7ZXS7
    UniProtKB/TrEMBL
    A0A974BUI6, A0A974BYI1
    Related
    ENSXLAP00005037385.1, ENSXLAT00005038294.1
    Conserved Domains (3) summary
    smart00037
    Location:42 → 75
    CNX; Connexin homologues
    smart01089
    Location:186 → 252
    Connexin_CCC; Gap junction channel protein cysteine-rich domain
    pfam00029
    Location:2 → 254
    Connexin; Connexin

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054388.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    52479375..52496079 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q7ZXS7.1 GenPept UniProtKB/Swiss-Prot:Q7ZXS7

Gene LinkOut

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